RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 B4GALT5O43286 388 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 RPS6KA5O75582 802 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 FTLP02792 175 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-234ENST00000642041 EDN1P05305 212 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 TNFSF9P41273 254 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 RAB27AP51159 221 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 AMPD2Q01433 879 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 CFAP221Q4G0U5 840 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 TMC7Q7Z402 723 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 LRRC52Q8N7C0 313 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 SUMF1Q8NBK3 374 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 OR5B17Q8NGF7 314 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 NAP1L3Q99457 506 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-234ENST00000642041 IRX2Q9BZI1 471 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-234ENST00000642041 UBN1Q9NPG3 1134 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 HCSTQ9UBK5 93 aa18.25■□□□□ 0.51
PHGDH-234ENST00000642041 STK25O00506 426 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 CLSTN1O94985 981 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 MOCS3O95396 460 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 SP9P0CG40 484 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 CXCL8P10145 99 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 POLR2BP30876 1174 aaKnown RBP18.24■□□□□ 0.51
PHGDH-234ENST00000642041 RPS6KA1Q15418 735 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 RARS2Q5T160 578 aaKnown RBP18.24■□□□□ 0.51
PHGDH-234ENST00000642041 CCDC181Q5TID7 509 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 SLFN11Q7Z7L1 901 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 MRPL43Q8N983 215 aaKnown RBP18.24■□□□□ 0.51
PHGDH-234ENST00000642041 LNX1Q8TBB1 728 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-234ENST00000642041 ACSF2Q96CM8 615 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-234ENST00000642041 RPS6KC1Q96S38 1066 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 TRAIPQ9BWF2 469 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 MTMR12Q9C0I1 747 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 CDHR5Q9HBB8 845 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 SLC38A7Q9NVC3 462 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 AJAP1Q9UKB5 411 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-234ENST00000642041 AMFRQ9UKV5 643 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 SCINQ9Y6U3 715 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 CACNA1IQ9P0X4 2223 aa18.24■□□□□ 0.51
PHGDH-234ENST00000642041 KIF4AO95239 1232 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 KCNE1P15382 129 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 GNA15P30679 374 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 HOXA11P31270 313 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 NSFP46459 744 aaKnown RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 KRT17Q04695 432 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 COL9A2Q14055 689 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 MEI1Q5TIA1 1274 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 C11orf63Q6NUN7 778 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 ZNF572Q7Z3I7 529 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 TMEM40Q8WWA1 233 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 ZNF560Q96MR9 790 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 CARD6Q9BX69 1037 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 BCO2Q9BYV7 579 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 DPP3Q9NY33 737 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 CNTN3Q9P232 1028 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 WNT16Q9UBV4 365 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 STRIP2Q9ULQ0 834 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 PCDHGC3Q9UN70 934 aa18.23■□□□□ 0.51
PHGDH-234ENST00000642041 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
PHGDH-234ENST00000642041 C2orf71A6NGG8 1288 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 TTLL13PA6NNM8 815 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 CLASP2O75122 1294 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 CSDE1O75534 798 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 CYP1A1P04798 512 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 CALB1P05937 261 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 ADRB1P08588 477 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 ACO1P21399 889 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 SLC1A1P43005 524 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 TNNC1P63316 161 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 FMO1Q01740 532 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 CLEC16AQ2KHT3 1053 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 GLE1Q53GS7 698 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 XKR4Q5GH76 650 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 ZBTB41Q5SVQ8 909 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 TMEM270Q6UE05 265 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 DPH6Q7L8W6 267 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 PEX26Q7Z412 305 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 NOP9Q86U38 636 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 SLC47A2Q86VL8 602 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 FAM228AQ86W67 206 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 C12orf76Q8N812 135 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 RBBP8NLQ8NC74 664 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 TMEM35BQ8NCS4 154 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 TPCN2Q8NHX9 752 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 SLC35G2Q8TBE7 412 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 RSPH1Q8WYR4 309 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 DDX1Q92499 740 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 LHX5Q9H2C1 402 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 KCNK12Q9HB15 430 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 DZANK1Q9NVP4 752 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 TRIM10Q9UDY6 481 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 NOC2LQ9Y3T9 749 aaKnown RBP18.22■□□□□ 0.51
PHGDH-234ENST00000642041 NUB1Q9Y5A7 615 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 DUSP10Q9Y6W6 482 aa18.22■□□□□ 0.51
PHGDH-234ENST00000642041 ARHGEF37A1IGU5 675 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 PRR5-ARHGAP8B1AHC4 643 aa18.21■□□□□ 0.51
PHGDH-234ENST00000642041 PALMO75781 387 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms