RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 TNNC1P63316 161 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 ZXDBP98169 803 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 TRPC3Q13507 836 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 CEP135Q66GS9 1140 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 KRBA2Q6ZNG9 492 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 DPH6Q7L8W6 267 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 MON1AQ86VX9 555 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
COLCA2-207ENST00000639470 ERCC4Q92889 916 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-207ENST00000639470 E2F7Q96AV8 911 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 B3GNT5Q9BYG0 378 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 SNX25Q9H3E2 840 aa17.49■□□□□ 0.39
COLCA2-207ENST00000639470 PRMT8Q9NR22 394 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-207ENST00000639470 MAGEC2Q9UBF1 373 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-207ENST00000639470 MRPS17Q9Y2R5 130 aaKnown RBP17.49■□□□□ 0.39
COLCA2-207ENST00000639470 ANTXRLA6NF34 631 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
COLCA2-207ENST00000639470 TRIM49P0CI25 452 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 TRIM49CP0CI26 452 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 PTPN1P18031 435 aaKnown RBP17.48■□□□□ 0.39
COLCA2-207ENST00000639470 AVPR1AP37288 418 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 GRIK1P39086 918 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 IFRD2Q12894 506 aaPredicted RBP17.48■□□□□ 0.39
COLCA2-207ENST00000639470 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 CELF5Q8N6W0 485 aaKnown RBP17.48■□□□□ 0.39
COLCA2-207ENST00000639470 SUMF1Q8NBK3 374 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 MYCBPAPQ8TBZ2 947 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 SPATA18Q8TC71 538 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 NELL2Q99435 816 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 FBRSL1Q9HCM7 1045 aaKnown RBP17.48■□□□□ 0.39
COLCA2-207ENST00000639470 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 OBP2AQ9NY56 170 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 GCNT4Q9P109 453 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 WNT6Q9Y6F9 365 aa17.48■□□□□ 0.39
COLCA2-207ENST00000639470 CFAP54Q96N23 3096 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 PTPRZ1P23471 2315 aaPredicted RBP17.47■□□□□ 0.39
COLCA2-207ENST00000639470 A8MXQ7 604 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 TACC1O75410 805 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 ZNF202O95125 648 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 MAGEA11P43364 429 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 SNRPFP62306 86 aaKnown RBP17.47■□□□□ 0.39
COLCA2-207ENST00000639470 SRSF5Q13243 272 aaKnown RBP17.47■□□□□ 0.39
COLCA2-207ENST00000639470 NCOA4Q13772 614 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 ZNF699Q32M78 642 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 C4orf50Q6ZRC1 276 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 TRMT2BQ96GJ1 504 aaKnown RBP17.47■□□□□ 0.39
COLCA2-207ENST00000639470 FUBP3Q96I24 572 aaKnown RBP eCLIP17.47■□□□□ 0.39
COLCA2-207ENST00000639470 FBXO4Q9UKT5 387 aa17.47■□□□□ 0.39
COLCA2-207ENST00000639470 RIF1Q5UIP0 2472 aaKnown RBP17.46■□□□□ 0.39
COLCA2-207ENST00000639470 NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.39
COLCA2-207ENST00000639470 NCAM2O15394 837 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 AKAP3O75969 853 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 RHOBTB3O94955 611 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 WEE1P30291 646 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 CLDN10P78369 228 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 PNOCQ13519 176 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 ZNF77Q15935 545 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 LPAL2Q16609 132 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 PAQR9Q6ZVX9 377 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 B3GALNT2Q8NCR0 500 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 KCNK16Q96T55 309 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 LINC00597Q9H2U6 94 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 MMRN2Q9H8L6 949 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 CGNQ9P2M7 1197 aaKnown RBP17.46■□□□□ 0.39
COLCA2-207ENST00000639470 USP25Q9UHP3 1055 aa17.46■□□□□ 0.39
COLCA2-207ENST00000639470 OBSL1O75147 1896 aa17.46■□□□□ 0.38
COLCA2-207ENST00000639470 A0A1W2PQ27 194 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 A0A1W2PQ64 194 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 A0A1W2PQD8 194 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 PDXKO00764 312 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 CKMP06732 381 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 CCDC130P13994 396 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 PPP3CAQ08209 521 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 USP4Q13107 963 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 PSMD2Q13200 908 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 RUNX3Q13761 415 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 MTF1Q14872 753 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 ITPRIPL2Q3MIP1 535 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 FSTL4Q6MZW2 842 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 SV2AQ7L0J3 742 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 ACOT1Q86TX2 421 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 ZBTB44Q8NCP5 570 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 GOLGA5Q8TBA6 731 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 SH3RF2Q8TEC5 729 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 NELL1Q92832 810 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
COLCA2-207ENST00000639470 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
COLCA2-207ENST00000639470 C8orf33Q9H7E9 229 aaPredicted RBP17.45■□□□□ 0.38
COLCA2-207ENST00000639470 APOBEC3GQ9HC16 384 aaKnown RBP17.45■□□□□ 0.38
COLCA2-207ENST00000639470 KINO60870 393 aaKnown RBP17.44■□□□□ 0.38
COLCA2-207ENST00000639470 STAU1O95793 577 aaKnown RBP17.44■□□□□ 0.38
COLCA2-207ENST00000639470 HLA-DRAP01903 254 aa17.44■□□□□ 0.38
COLCA2-207ENST00000639470 NR2F2P24468 414 aa17.44■□□□□ 0.38
COLCA2-207ENST00000639470 MAGEA9P43362 315 aa17.44■□□□□ 0.38
COLCA2-207ENST00000639470 GCLMP48507 274 aa17.44■□□□□ 0.38
COLCA2-207ENST00000639470 PGFP49763 221 aa17.44■□□□□ 0.38
COLCA2-207ENST00000639470 CCINQ13939 588 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms