RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 UXTQ9UBK9 157 aaPredicted RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 EBF1Q9UH73 591 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ZMIZ1Q9ULJ6 1067 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.42□□□□□ -1.06
CLK1-215ENST00000621181 DMXL2Q8TDJ6 3036 aa8.42□□□□□ -1.06
CLK1-215ENST00000621181 FREM2Q5SZK8 3169 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 KPNA7A9QM74 516 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
CLK1-215ENST00000621181 TBCAO75347 108 aaKnown RBP8.41□□□□□ -1.06
CLK1-215ENST00000621181 CKMP06732 381 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 ABCD1P33897 745 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 IFNAR2P48551 515 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 GPR15P49685 360 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 NFE2Q16621 373 aaPredicted RBP8.41□□□□□ -1.06
CLK1-215ENST00000621181 SV2CQ496J9 727 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 USP39Q53GS9 565 aaKnown RBP8.41□□□□□ -1.06
CLK1-215ENST00000621181 SDHAF4Q5VUM1 108 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 SLC39A4Q6P5W5 647 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 MON1AQ86VX9 555 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 TSTD1Q8NFU3 115 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 RASSF8Q8NHQ8 419 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 CCDC26Q8TAB7 109 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 OSCP1Q8WVF1 389 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
CLK1-215ENST00000621181 KCNN1Q92952 543 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 CD101Q93033 1021 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 CALML4Q96GE6 196 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 ZNF560Q96MR9 790 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 FUCA2Q9BTY2 467 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 TSPY26PQ9H489 355 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 INVSQ9Y283 1065 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 WNT6Q9Y6F9 365 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 THADAQ6YHU6 1953 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 OBSL1O75147 1896 aa8.41□□□□□ -1.06
CLK1-215ENST00000621181 TRAV19A0A0A6YYK7 116 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 SPINK2P20155 84 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 ZNF131P52739 623 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 RPL10AP62906 217 aaKnown RBP8.4□□□□□ -1.06
CLK1-215ENST00000621181 NR1H3Q13133 447 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 ZNF268Q14587 947 aaPredicted RBP8.4□□□□□ -1.06
CLK1-215ENST00000621181 KCNB1Q14721 858 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 DDR2Q16832 855 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 TMEM119Q4V9L6 283 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 ARL6IP4Q66PJ3 421 aaKnown RBP8.4□□□□□ -1.06
CLK1-215ENST00000621181 SLFN12LQ6IEE8 588 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 ANO7Q6IWH7 933 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 CYP2U1Q7Z449 544 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 FSIP1Q8NA03 581 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 SYAP1Q96A49 352 aaPredicted RBP8.4□□□□□ -1.06
CLK1-215ENST00000621181 CYP2S1Q96SQ9 504 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 TPSD1Q9BZJ3 242 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 CCSER1Q9C0I3 900 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 TMEM9BQ9NQ34 198 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 TMLHEQ9NVH6 421 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 AGO2Q9UKV8 859 aaKnown RBP8.4□□□□□ -1.06
CLK1-215ENST00000621181 ZKSCAN5Q9Y2L8 839 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 KIF3AQ9Y496 699 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 ZFYVE26Q68DK2 2539 aa8.4□□□□□ -1.06
CLK1-215ENST00000621181 ASCC3Q8N3C0 2202 aaKnown RBP8.4□□□□□ -1.06
CLK1-215ENST00000621181 TISP43B9A030 160 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 TADA3O75528 432 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 USP17L7P0C7H9 530 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 CEACAM1P13688 526 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 CYP2F1P24903 491 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 UBA7P41226 1012 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 PNPLA4P41247 253 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 TERF1P54274 439 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 SEC13P55735 322 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 UBE2HP62256 183 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 ZNF77Q15935 545 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 UAP1L1Q3KQV9 507 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 ZC2HC1CQ53FD0 456 aaPredicted RBP8.4□□□□□ -1.07
CLK1-215ENST00000621181 C2orf27AQ580R0 203 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 CCDC183Q5T5S1 534 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 PMS2CLQ68D20 193 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 TTC30AQ86WT1 665 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 EFCAB13Q8IY85 973 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 POMGNT1Q8WZA1 660 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 EZH1Q92800 747 aaPredicted RBP8.4□□□□□ -1.07
CLK1-215ENST00000621181 AK8Q96MA6 479 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 NAP1L5Q96NT1 182 aaPredicted RBP8.4□□□□□ -1.07
CLK1-215ENST00000621181 SLC22A12Q96S37 553 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 TMEM206Q9H813 350 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 ABCB6Q9NP58 842 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 SMC3Q9UQE7 1217 aa8.4□□□□□ -1.07
CLK1-215ENST00000621181 PATE3B3GLJ2 98 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 ANKRD63C9JTQ0 380 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 HUS1O60921 280 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 IL18RAPO95256 599 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 ACAT1P24752 427 aaKnown RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 GJB2P29033 226 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 DHPSP49366 369 aaPredicted RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 IRX4P78413 519 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 TFAMQ00059 246 aaKnown RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 GTF2BQ00403 316 aa8.39□□□□□ -1.07
CLK1-215ENST00000621181 COL9A2Q14055 689 aaPredicted RBP8.39□□□□□ -1.07
CLK1-215ENST00000621181 MCM6Q14566 821 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms