RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CCDC85BQ15834 202 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 FIGNQ5HY92 759 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ZNF484Q5JVG2 852 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 LMBRD2Q68DH5 695 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 IL31Q6EBC2 164 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SLC13A5Q86YT5 568 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 C4orf33Q8N1A6 199 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 IPMKQ8NFU5 416 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RAET1EQ8TD07 263 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CAVIN3Q969G5 261 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 DPP3Q9NY33 737 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 PRRG1O14668 218 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 MLNP12872 115 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 PON1P27169 355 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 FXR1P51114 621 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHD9-221ENST00000615216 CNTN1Q12860 1018 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TRIP10Q15642 601 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TRIP4Q15650 581 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 DPF2Q92785 391 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 GPR63Q9BZJ6 419 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SLC40A1Q9NP59 571 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SCUBE2Q9NQ36 999 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 AGPAT3Q9NRZ7 376 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.74□□□□□ -1.656e-7■■■■□ 19.3
CHD9-221ENST00000615216 RNF112Q9ULX5 631 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 PARP4Q9UKK3 1724 aaKnown RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 THRAP10827 490 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RASA1P20936 1047 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RANBP1P43487 201 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 NAMPTP43490 491 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ALDH1A3P47895 512 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 KPNA1P52294 538 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 FOXD4Q12950 439 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 DCAF6Q58WW2 860 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CDC42EP5Q6NZY7 148 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 GPR141Q7Z602 305 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SH2D3CQ8N5H7 860 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 PABPC5Q96DU9 382 aaKnown RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 ZNF333Q96JL9 665 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SLC24A3Q9HC58 644 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TSR3Q9UJK0 312 aaKnown RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 ADAM30Q9UKF2 790 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ARHGAP23Q9P227 1491 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 C3P01024 1663 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CYTH3O43739 400 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 MPOP05164 745 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RGS7P49802 495 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TAF6P49848 677 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 PEX5P50542 639 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 MCL1Q07820 350 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TWF1Q12792 350 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 STK4Q13043 487 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TTC33Q6PID6 262 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 FBXO33Q7Z6M2 555 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 GPRC5AQ8NFJ5 357 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CASKIN2Q8WXE0 1202 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ZNF512Q96ME7 567 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 AGAP3Q96P47 875 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SLITRK1Q96PX8 696 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SYTL2Q9HCH5 934 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 AAASQ9NRG9 546 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ZNF70Q9UC06 446 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 SOX13Q9UN79 622 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHD9-221ENST00000615216 ALG6Q9Y672 507 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 B2RBV5 119 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 TK2O00142 265 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 GUCA1CO95843 209 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RARBP10826 455 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 NUP107P57740 925 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SCARF1Q14162 830 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 MRNIPQ6NTE8 343 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ZNF467Q7Z7K2 595 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 MICALL2Q8IY33 904 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CENPLQ8N0S6 344 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 EXD1Q8NHP7 514 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 ZNF507Q8TCN5 953 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 FAM151AQ8WW52 585 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 JADE3Q92613 823 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 AGBL1Q96MI9 1066 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 KLHL4Q9C0H6 718 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 MARCOQ9UEW3 520 aaPredicted RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 SLC24A2Q9UI40 661 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 STARD13Q9Y3M8 1113 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 NBPF26B4DH59 902 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CAMTA2O94983 1202 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 IFNA14P01570 189 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CETPP11597 493 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 NQO1P15559 274 aaKnown RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 TKTP29401 623 aaKnown RBP4.74□□□□□ -1.65
CHD9-221ENST00000615216 RRM2P31350 389 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RGS2P41220 211 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SPDYCQ5MJ68 293 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 SDE2Q6IQ49 451 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 GLB1LQ6UWU2 654 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RAD9BQ6WBX8 426 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 RFX8Q6ZV50 586 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 CYP4Z1Q86W10 505 aa4.74□□□□□ -1.65
CHD9-221ENST00000615216 NBPF15Q8N660 670 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms