RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 MRPS31Q92665 395 aaKnown RBP20.55■□□□□ 0.88
TCF3-219ENST00000610756 LRRC3BQ96PB8 259 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 NELL2Q99435 816 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 OSBPL6Q9BZF3 934 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 SDCBP2Q9H190 292 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 HEBP1Q9NRV9 189 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 MAN1B1Q9UKM7 699 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 NCANO14594 1321 aa20.55■□□□□ 0.88
TCF3-219ENST00000610756 TRIM66O15016 1216 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 SLC16A3O15427 465 aaKnown RBP20.54■□□□□ 0.88
TCF3-219ENST00000610756 STX10O60499 249 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 CLSTN1O94985 981 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 CCNE1P24864 410 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
TCF3-219ENST00000610756 RAP1GAPP47736 663 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 MLLT6P55198 1093 aaPredicted RBP20.54■□□□□ 0.88
TCF3-219ENST00000610756 UBE2HP62256 183 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 ISM2Q6H9L7 571 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 UNC93AQ86WB7 457 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 YAF2Q8IY57 180 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 CELF5Q8N6W0 485 aaKnown RBP20.54■□□□□ 0.88
TCF3-219ENST00000610756 MAB21L3Q8N8X9 362 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 DTWD2Q8NBA8 298 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 STKLD1Q8NE28 680 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 PJA1Q8NG27 643 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 B3GNT5Q9BYG0 378 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 IMPG2Q9BZV3 1241 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 ELOVL4Q9GZR5 314 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 EHD2Q9NZN4 543 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 DLGAP2Q9P1A6 1054 aa20.54■□□□□ 0.88
TCF3-219ENST00000610756 ARNTLO00327 626 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 PSMA7O14818 248 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 GLULP15104 373 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 BMP6P22004 513 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 ANXA13P27216 316 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 AVPR1AP37288 418 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 ASPAP45381 313 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 NOP14P78316 857 aaKnown RBP20.53■□□□□ 0.88
TCF3-219ENST00000610756 TXNDC8Q6A555 127 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 SPOPLQ6IQ16 392 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 SCARA5Q6ZMJ2 495 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 ZNF852Q6ZMS4 543 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 DENND5BQ6ZUT9 1274 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 FAXDC2Q96IV6 333 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 BCO2Q9BYV7 579 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 FOXQ1Q9C009 403 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 CYP3A43Q9HB55 503 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 KMT2EQ8IZD2 1858 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 SHISA7A6NL88 538 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 FAM170BA6NMN3 283 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 F8VP50 259 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 MAN2B1O00754 1011 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 TADA3O75528 432 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 PRAMEF12O95522 483 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 DCNP07585 359 aaKnown RBP20.53■□□□□ 0.88
TCF3-219ENST00000610756 CD44P16070 742 aaKnown RBP20.53■□□□□ 0.88
TCF3-219ENST00000610756 MORC3Q14149 939 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 ARHGAP29Q52LW3 1261 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 FOXR2Q6PJQ5 311 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 TPRG1Q6ZUI0 275 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 PAQR9Q6ZVX9 377 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 CCDC150Q8NCX0 1101 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 BPIFB1Q8TDL5 484 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 TTLL2Q9BWV7 592 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 ZNF518BQ9C0D4 1074 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 APOBEC3GQ9HC16 384 aaKnown RBP20.53■□□□□ 0.88
TCF3-219ENST00000610756 TDP1Q9NUW8 608 aa20.53■□□□□ 0.88
TCF3-219ENST00000610756 PPP1R3GB7ZBB8 358 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 H0Y858 1186 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 CLDN5O00501 218 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 CD72P21854 359 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 PPP3CCP48454 512 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 NDST1P52848 882 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 CACNA2D1P54289 1103 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 INCA1Q0VD86 236 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 ACOT1Q86TX2 421 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 FBXL13Q8NEE6 735 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 USP13Q92995 863 aaPredicted RBP20.52■□□□□ 0.87
TCF3-219ENST00000610756 MMRN2Q9H8L6 949 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 LTB4R2Q9NPC1 389 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 TMEM30AQ9NV96 361 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 THG1LQ9NWX6 298 aaKnown RBP20.52■□□□□ 0.87
TCF3-219ENST00000610756 RAB20Q9NX57 234 aa20.52■□□□□ 0.87
TCF3-219ENST00000610756 MRPS17Q9Y2R5 130 aaKnown RBP20.52■□□□□ 0.87
TCF3-219ENST00000610756 MTF2Q9Y483 593 aaPredicted RBP20.52■□□□□ 0.87
TCF3-219ENST00000610756 CACNA1HO95180 2353 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 TRIM49BA6NDI0 452 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 MXI1P50539 228 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 USP46P62068 366 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 PLCB2Q00722 1185 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 ZNF268Q14587 947 aaPredicted RBP20.51■□□□□ 0.87
TCF3-219ENST00000610756 FILIP1Q7Z7B0 1213 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 CEP63Q96MT8 703 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 NIF3L1Q9GZT8 377 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 SMG9Q9H0W8 520 aaKnown RBP20.51■□□□□ 0.87
TCF3-219ENST00000610756 KIF9Q9HAQ2 790 aa20.51■□□□□ 0.87
TCF3-219ENST00000610756 METTL14Q9HCE5 456 aaKnown RBP20.51■□□□□ 0.87
TCF3-219ENST00000610756 ARMCX3Q9UH62 379 aaPredicted RBP20.51■□□□□ 0.87
TCF3-219ENST00000610756 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
TCF3-219ENST00000610756 NCAM2O15394 837 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms