RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 DHX40Q8IX18 779 aaKnown RBP20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 C12orf29Q8N999 325 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 ITFG1Q8TB96 612 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 KAT5Q92993 513 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 TMEM176AQ96HP8 235 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 UBE2TQ9NPD8 197 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 AVENQ9NQS1 362 aaPredicted RBP20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.89■□□□□ 0.931e-8■■■■■ 45.1
SHKBP1-214ENST00000597396 PCDHB4Q9Y5E5 795 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 PATJQ8NI35 1801 aa20.89■□□□□ 0.93
SHKBP1-214ENST00000597396 C19orf67A6NJJ6 358 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 GPR37L1O60883 481 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 CSH1P0DML2 217 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 CSH2P0DML3 217 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 PON1P27169 355 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 ADORA2BP29275 332 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 COPB1P53618 953 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 RAD23BP54727 409 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 PHLDB3Q6NSJ2 640 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 PLCD3Q8N3E9 789 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 STKLD1Q8NE28 680 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 SLC2A14Q8TDB8 520 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 ING5Q8WYH8 240 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 FAM122AQ96E09 287 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 CYFIP2Q96F07 1278 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 SMARCD1Q96GM5 515 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 FAM81BQ96LP2 452 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 HEXIM2Q96MH2 286 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 MYADMQ96S97 322 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 MAGED2Q9UNF1 606 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 HCN4Q9Y3Q4 1203 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 MYO16Q9Y6X6 1858 aa20.88■□□□□ 0.93
SHKBP1-214ENST00000597396 ANAPC1Q9H1A4 1944 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 SLC38A8A6NNN8 435 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 F8VP50 259 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 ZNF18P17022 549 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 EPHA5P54756 1037 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 SLC5A9Q2M3M2 681 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 FKBP15Q5T1M5 1219 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 TMEM270Q6UE05 265 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 TMC8Q8IU68 726 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 FUKQ8N0W3 1084 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 UBR7Q8N806 425 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 SLC4A11Q8NBS3 891 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 TCEAL4Q96EI5 215 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 GCNAQ96QF7 691 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 ZNF334Q9HCZ1 680 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 C11orf16Q9NQ32 467 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 KRT82Q9NSB4 513 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 APEX2Q9UBZ4 518 aa20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 LIMA1Q9UHB6 759 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-214ENST00000597396 AP1G2O75843 785 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 FGF19O95750 216 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 CAVIN2O95810 425 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 CD19P15391 556 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 CEBPBP17676 345 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 GABRR2P28476 465 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 PLA2G5P39877 138 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 MFAP3P55082 362 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 TPM4P67936 248 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 MTMR3Q13615 1198 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 IQCB1Q15051 598 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 PRSS36Q5K4E3 855 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 PAQR9Q6ZVX9 377 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 ENOSF1Q7L5Y1 443 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 ZDHHC14Q8IZN3 488 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 FGF13Q92913 245 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 SPATA17Q96L03 361 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 C8orf48Q96LL4 319 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 KREMEN1Q96MU8 473 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 HNRNPABQ99729 332 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 LRRC3Q9BY71 257 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 HSD3B7Q9H2F3 369 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 CBX8Q9HC52 389 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 DMAP1Q9NPF5 467 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 CDH7Q9ULB5 785 aa20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 ZFP37Q9Y6Q3 630 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-214ENST00000597396 FAM200BP0CF97 657 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 KRT5P13647 590 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 GJA1P17302 382 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 ACO1P21399 889 aaKnown RBP20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 CCR2P41597 374 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 CACNA2D1P54289 1103 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 ARHGAP44Q17R89 818 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 GJB7Q6PEY0 223 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 NPAS3Q8IXF0 933 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 JAKMIP2Q96AA8 810 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 CEP295NLQ96MC4 621 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 ATXN3LQ9H3M9 355 aa20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 UXTQ9UBK9 157 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 NUP210Q8TEM1 1887 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-214ENST00000597396 A0A1W2PRU2 124 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 NOL4O94818 638 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 LAMP2P13473 410 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 ATP1A3P13637 1013 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 ALADP13716 330 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 HMGA1P17096 107 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 CDC25CP30307 473 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 APBA1Q02410 837 aa20.84■□□□□ 0.93
SHKBP1-214ENST00000597396 SGO2Q562F6 1265 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms