RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 EML3Q32P44 896 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 SLC39A12Q504Y0 691 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 TRIM61Q5EBN2 209 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 KRT79Q5XKE5 535 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 RINT1Q6NUQ1 792 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 RAB44Q7Z6P3 723 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 TMEM150AQ86TG1 271 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 HDDC3Q8N4P3 179 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 NSUN7Q8NE18 718 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 DEFB124Q8NES8 71 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 TTC8Q8TAM2 541 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 COL26A1Q96A83 441 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 FUBP3Q96I24 572 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 RPF1Q9H9Y2 349 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 DUS2Q9NX74 493 aaKnown RBP9.39□□□□□ -0.91
SMAD4-215ENST00000592911 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 GPSM3Q9Y4H4 160 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 PCDHB5Q9Y5E4 795 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
SMAD4-215ENST00000592911 MYOFQ9NZM1 2061 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 PTPRBP23467 1997 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TRAV19A0A0A6YYK7 116 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 WNT7AO00755 349 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SLC9A3R1O14745 358 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SLC16A4O15374 487 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 AP5Z1O43299 807 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 FAM189A1O60320 539 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 OPHN1O60890 802 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SERPINF2P08697 491 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TAF6P49848 677 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SIM1P81133 766 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TSPY1Q01534 308 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 DUOXA1Q1HG43 343 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 EOGTQ5NDL2 527 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TTC38Q5R3I4 469 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 HYIQ5T013 277 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 C9orf57Q5W0N0 161 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TRMT11Q7Z4G4 463 aaKnown RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TMEM86AQ8N2M4 240 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 MAB21L3Q8N8X9 362 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 OR10T2Q8NGX3 314 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 ADAMTS14Q8WXS8 1223 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 ZNF560Q96MR9 790 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 LPIN3Q9BQK8 851 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 DNAAF2Q9NVR5 837 aaKnown RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 PILRBQ9UKJ0 227 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 ODF2LQ9ULJ1 636 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 SLC6A14Q9UN76 642 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 ARHGAP26Q9UNA1 814 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 CCL26Q9Y258 94 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 TIMM13Q9Y5L4 95 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-215ENST00000592911 PLXNB3Q9ULL4 1909 aa9.38□□□□□ -0.91
SMAD4-215ENST00000592911 KNL1Q8NG31 2342 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 LACTBL1A8MY62 500 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 DCLK1O15075 740 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 HYAL3O43820 417 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 SYPP08247 313 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ARSAP15289 507 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ENGP17813 658 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 DHPSP49366 369 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ATXN3P54252 364 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 NCKAP1LP55160 1127 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 GFPT1Q06210 699 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 TMEM132DQ14C87 1099 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ENOX2Q16206 610 aaKnown RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ECM1Q16610 540 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 SV2CQ496J9 727 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 CFAP221Q4G0U5 840 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 LYSMD4Q5XG99 296 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 TRIM68Q6AZZ1 485 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 GLRX5Q86SX6 157 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 TTC9BQ8N6N2 239 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 MDGA1Q8NFP4 955 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 PIGKQ92643 395 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 EZH1Q92800 747 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ZBTB45Q96K62 511 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ACBD6Q9BR61 282 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ZDHHC5Q9C0B5 715 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 FBRSL1Q9HCM7 1045 aaKnown RBP9.37□□□□□ -0.91
SMAD4-215ENST00000592911 SUSD2Q9UGT4 822 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 NFE2L3Q9Y4A8 694 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 ADAMTS9Q9P2N4 1935 aa9.37□□□□□ -0.91
SMAD4-215ENST00000592911 MYH10P35580 1976 aa9.36□□□□□ -0.91
SMAD4-215ENST00000592911 A0A0B4J269 797 aa9.36□□□□□ -0.91
SMAD4-215ENST00000592911 A0A1W2PQD8 194 aa9.36□□□□□ -0.91
SMAD4-215ENST00000592911 MYMKA6NI61 221 aa9.36□□□□□ -0.91
SMAD4-215ENST00000592911 E9PAM4 449 aa9.36□□□□□ -0.91
SMAD4-215ENST00000592911 CYB561D2O14569 222 aa9.36□□□□□ -0.91
SMAD4-215ENST00000592911 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
SMAD4-215ENST00000592911 HARSP12081 509 aaKnown RBP9.36□□□□□ -0.91
SMAD4-215ENST00000592911 SPINK2P20155 84 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms