RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-205ENST00000588745 ACTRT1Q8TDG2 376 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 UBXN4Q92575 508 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 KRT35Q92764 455 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 VWCEQ96DN2 955 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 RTP3Q9BQQ7 232 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
SMAD4-205ENST00000588745 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 DNAJB4Q9UDY4 337 aa12.04□□□□□ -0.48
SMAD4-205ENST00000588745 PRG3Q9Y2Y8 225 aaPredicted RBP12.04□□□□□ -0.48
SMAD4-205ENST00000588745 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 PGRMC1O00264 195 aaKnown RBP12.03□□□□□ -0.48
SMAD4-205ENST00000588745 XPO1O14980 1071 aaKnown RBP12.03□□□□□ -0.48
SMAD4-205ENST00000588745 KIAA0355O15063 1070 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 CEP104O60308 925 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 TIMP1P01033 207 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 KRT3P12035 628 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 RPL34P49207 117 aaKnown RBP12.03□□□□□ -0.48
SMAD4-205ENST00000588745 PEX5P50542 639 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 SNX16P57768 344 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 TUBB4BP68371 445 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 OGDHQ02218 1023 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 ZNF252P-AS1Q0IIN9 211 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-205ENST00000588745 ELF2Q15723 593 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
SMAD4-205ENST00000588745 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 FAM183BPQ6ZVS7 135 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 TMEM110Q86TL2 294 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 FAM35AQ86V20 835 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 FNIP1Q8TF40 1166 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 TSC1Q92574 1164 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 ALG3Q92685 438 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 MS4A14Q96JA4 679 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 TMEM175Q9BSA9 504 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 PRDM5Q9NQX1 630 aaPredicted RBP12.03□□□□□ -0.48
SMAD4-205ENST00000588745 PCDHA3Q9Y5H8 950 aa12.03□□□□□ -0.48
SMAD4-205ENST00000588745 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.48
SMAD4-205ENST00000588745 MYBPHLA2RUH7 354 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 TRIM43BA6NCK2 446 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 PIK3R2O00459 728 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 CLDN5O00501 218 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 NRP1O14786 923 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 PSTPIP1O43586 416 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 TRAPPC3O43617 180 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 FAM200BP0CF97 657 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 NPR3P17342 541 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 RFC1P35251 1148 aaPredicted RBP12.02□□□□□ -0.49
SMAD4-205ENST00000588745 ACADSBP45954 432 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 RWDD2BP57060 319 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 SLC8A3P57103 927 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 OVOS1Q6IE37 1185 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 OLFML1Q6UWY5 402 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.02□□□□□ -0.495e-7■■□□□ 13.4
SMAD4-205ENST00000588745 CLEC20AQ6ZU45 233 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 PAQR9Q6ZVX9 377 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 ZDHHC17Q8IUH5 632 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 THEM5Q8N1Q8 247 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 NIPA2Q8N8Q9 360 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 NOA1Q8NC60 698 aaKnown RBP12.02□□□□□ -0.49
SMAD4-205ENST00000588745 SPATA4Q8NEY3 305 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 OR10T2Q8NGX3 314 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 MYCBPAPQ8TBZ2 947 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 MYLPFQ96A32 169 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 TRIM43Q96BQ3 446 aaPredicted RBP12.02□□□□□ -0.49
SMAD4-205ENST00000588745 PCED1BQ96HM7 432 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 PIWIL1Q96J94 861 aaKnown RBP12.02□□□□□ -0.49
SMAD4-205ENST00000588745 HSFY1Q96LI6 401 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
SMAD4-205ENST00000588745 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.02□□□□□ -0.491e-10■□□□□ 10.9
SMAD4-205ENST00000588745 DUSP16Q9BY84 665 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 B3GNT5Q9BYG0 378 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 KRT82Q9NSB4 513 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 MARCH5Q9NX47 278 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 TTC7AQ9ULT0 858 aaPredicted RBP12.02□□□□□ -0.49
SMAD4-205ENST00000588745 USTQ9Y2C2 406 aa12.02□□□□□ -0.49
SMAD4-205ENST00000588745 SYN3O14994 580 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 PAPSS1O43252 624 aaPredicted RBP12.01□□□□□ -0.49
SMAD4-205ENST00000588745 TADA2AO75478 443 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 RAG1P15918 1043 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 PSMA2P25787 234 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 ITGB8P26012 769 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 SCNN1AP37088 669 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 SLC11A1P49279 550 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 TSPY1Q01534 308 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 YWHAHQ04917 246 aaPredicted RBP12.01□□□□□ -0.49
SMAD4-205ENST00000588745 PIGHQ14442 188 aaPredicted RBP12.01□□□□□ -0.49
SMAD4-205ENST00000588745 SEL1L2Q5TEA6 688 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 FAM171BQ6P995 826 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 RHOT1Q8IXI2 618 aa12.01□□□□□ -0.49
SMAD4-205ENST00000588745 EMC1Q8N766 993 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms