RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 F11P03951 625 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 FAM163BP0C2L3 166 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 DRD1P21728 446 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 WARSP23381 471 aaKnown RBP11.48□□□□□ -0.57
PNN-203ENST00000554117 MTF1Q14872 753 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 PSMD6Q15008 389 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 E2F4Q16254 413 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 KNOP1Q1ED39 458 aaKnown RBP11.48□□□□□ -0.57
PNN-203ENST00000554117 SOWAHAQ2M3V2 549 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 WDR72Q3MJ13 1102 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 FBXO43Q4G163 708 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 TDRD10Q5VZ19 366 aaKnown RBP11.48□□□□□ -0.57
PNN-203ENST00000554117 TXNDC8Q6A555 127 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 SUMF1Q8NBK3 374 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 TNIP3Q96KP6 325 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 SPATA17Q96L03 361 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 MYRFLQ96LU7 910 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 MED10Q9BTT4 135 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 ELOVL4Q9GZR5 314 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 EBF3Q9H4W6 596 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 SLC39A2Q9NP94 309 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 DUS2Q9NX74 493 aaKnown RBP11.48□□□□□ -0.57
PNN-203ENST00000554117 FRMD4BQ9Y2L6 1034 aa11.48□□□□□ -0.57
PNN-203ENST00000554117 CFAP54Q96N23 3096 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 ARNTLO00327 626 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 SLC9A3R1O14745 358 aaPredicted RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 GABRDO14764 452 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 CALUO43852 315 aaPredicted RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 LILRB5O75023 590 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 PDGFRBP09619 1106 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 CCDC192P0DO97 292 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 HDCP19113 662 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 BDNFP23560 247 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 SOX9P48436 509 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 PSMC1P62191 440 aaKnown RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 SATB1Q01826 763 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 CYP24A1Q07973 514 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 ZNF699Q32M78 642 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 PREPLQ4J6C6 727 aaPredicted RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 ZNF667Q5HYK9 610 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 RESP18Q5W5W9 173 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 HEATR6Q6AI08 1181 aaKnown RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 SHC4Q6S5L8 630 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 DDX42Q86XP3 938 aaKnown RBP eCLIP11.47□□□□□ -0.57
PNN-203ENST00000554117 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 ZSWIM2Q8NEG5 633 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 MYCBPAPQ8TBZ2 947 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 USP13Q92995 863 aaPredicted RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 HPS3Q969F9 1004 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 MYLPFQ96A32 169 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 ACDQ96AP0 544 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 SPATA32Q96LK8 384 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 MKNK1Q9BUB5 465 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 SMG9Q9H0W8 520 aaKnown RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 BLZF1Q9H2G9 400 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 TMLHEQ9NVH6 421 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 NXF1Q9UBU9 619 aaKnown RBP11.47□□□□□ -0.57
PNN-203ENST00000554117 PCDHA7Q9UN72 937 aa11.47□□□□□ -0.57
PNN-203ENST00000554117 TACC1O75410 805 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.57
PNN-203ENST00000554117 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.57
PNN-203ENST00000554117 GPR15P49685 360 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 TNK2Q07912 1038 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 IFRD2Q12894 506 aaPredicted RBP11.46□□□□□ -0.57
PNN-203ENST00000554117 FZD5Q13467 585 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 MDH1BQ5I0G3 518 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 SDHAF4Q5VUM1 108 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 FAM171BQ6P995 826 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 POTEHQ6S545 545 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 EPM2AIP1Q7L775 607 aaPredicted RBP11.46□□□□□ -0.57
PNN-203ENST00000554117 C12orf56Q8IXR9 622 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 DCLK2Q8N568 766 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 OSCP1Q8WVF1 389 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 NELL1Q92832 810 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 CD101Q93033 1021 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 RSPRY1Q96DX4 576 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 P2RY13Q9BPV8 354 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 NACA2Q9H009 215 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.57
PNN-203ENST00000554117 SIX4Q9UIU6 781 aa11.46□□□□□ -0.57
PNN-203ENST00000554117 RIF1Q5UIP0 2472 aaKnown RBP11.46□□□□□ -0.58
PNN-203ENST00000554117 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
PNN-203ENST00000554117 CHURC1-FNTBB4DL54 471 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 TRDMT1O14717 391 aaKnown RBP11.45□□□□□ -0.58
PNN-203ENST00000554117 STAU1O95793 577 aaKnown RBP11.45□□□□□ -0.58
PNN-203ENST00000554117 RETP07949 1114 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 SLFN14P0C7P3 912 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 KRT13P13646 458 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
PNN-203ENST00000554117 FNTBP49356 437 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 WNT7BP56706 349 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
PNN-203ENST00000554117 GOLGA8FQ08AF8 430 aa11.45□□□□□ -0.58
PNN-203ENST00000554117 GOLGA8DPQ0D2H9 430 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms