RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 PRR5-ARHGAP8B1AHC4 643 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 TRDMT1O14717 391 aaKnown RBP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 MAPK13O15264 365 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 ATP2C2O75185 946 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 ABL1P00519 1130 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 KRT13P13646 458 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 TCF3P15923 654 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 BDNFP23560 247 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 HOXA6P31267 233 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 IFNAR2P48551 515 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 NOP14P78316 857 aaKnown RBP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 CLDN10P78369 228 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 ARHGAP8P85298 464 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 STK4Q13043 487 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 KMT5BQ4FZB7 885 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 NUDT18Q6ZVK8 323 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 LONP2Q86WA8 852 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 DDX42Q86XP3 938 aaKnown RBP eCLIP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 NUP93Q8N1F7 819 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 CAMKK1Q8N5S9 505 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 SUMF1Q8NBK3 374 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 OSCP1Q8WVF1 389 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 NELL1Q92832 810 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 USP13Q92995 863 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 ATP2A3Q93084 1043 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 PCED1BQ96HM7 432 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 PKMYT1Q99640 499 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 FAM83CQ9BQN1 747 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 PRMT8Q9NR22 394 aaPredicted RBP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 TMLHEQ9NVH6 421 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 DUS2Q9NX74 493 aaKnown RBP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 TBC1D14Q9P2M4 693 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 NXF1Q9UBU9 619 aaKnown RBP6.95□□□□□ -1.3
FOXN3-205ENST00000553904 SLC8A2Q9UPR5 921 aa6.95□□□□□ -1.3
FOXN3-205ENST00000553904 CITO14578 2027 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 VWA8A3KMH1 1905 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 CCDC163A0A0D9SF12 145 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 NRG2O14511 850 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 STX10O60499 249 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 LILRB5O75023 590 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 RHOBTB3O94955 611 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF202O95125 648 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 PAPSS2O95340 614 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 NFATC1O95644 943 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 C4BPAP04003 597 aaKnown RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 PFKFB1P16118 471 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 YWHAQP27348 245 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 PSMC2P35998 433 aaKnown RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 GPR15P49685 360 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 VAMP7P51809 220 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 CDR1P51861 262 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MYL6P60660 151 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 PSMC1P62191 440 aaKnown RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 NUCB2P80303 420 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ENPEPQ07075 957 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ADAM9Q13443 819 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 NCOA4Q13772 614 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 SIM2Q14190 667 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 PUM1Q14671 1186 aaKnown RBP eCLIP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MTF1Q14872 753 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 PON2Q15165 354 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF699Q32M78 642 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 TMEM196Q5HYL7 178 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MDH1BQ5I0G3 518 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 SDHAF4Q5VUM1 108 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 CEP135Q66GS9 1140 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 LAIR1Q6GTX8 287 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 INTS8Q75QN2 995 aaKnown RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 TMEM150AQ86TG1 271 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 UNC93AQ86WB7 457 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 OSTM1Q86WC4 334 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 KIAA2013Q8IYS2 634 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF687Q8N1G0 1237 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 TTC39CQ8N584 583 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ARL14EPQ8N8R7 260 aaPredicted RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 B3GALNT2Q8NCR0 500 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 TTC8Q8TAM2 541 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 KBTBD7Q8WVZ9 684 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 OVCA2Q8WZ82 227 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ZNF516Q92618 1163 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MYLPFQ96A32 169 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 RSPRY1Q96DX4 576 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 FAXDC2Q96IV6 333 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ZFYVE19Q96K21 471 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 LRRC3BQ96PB8 259 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 CYP2S1Q96SQ9 504 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 P2RY13Q9BPV8 354 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MRPL45Q9BRJ2 306 aaKnown RBP6.94□□□□□ -1.3
FOXN3-205ENST00000553904 MED10Q9BTT4 135 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 EPC1Q9H2F5 836 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 FBXO44Q9H4M3 255 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 EBF3Q9H4W6 596 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ECT2Q9H8V3 914 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 DMAC2Q9NW81 257 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 RMND1Q9NWS8 449 aa6.94□□□□□ -1.3
FOXN3-205ENST00000553904 ARHGAP26Q9UNA1 814 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms