RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PTPN20Q4JDL3 420 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 SGO2Q562F6 1265 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 ARHGAP17Q68EM7 881 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 LLGL2Q6P1M3 1020 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 LCLAT1Q6UWP7 414 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 MCOLN2Q8IZK6 566 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC35F6Q8N357 371 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 B3GALNT2Q8NCR0 500 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 OR10T2Q8NGX3 314 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 SPATA18Q8TC71 538 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TMEM209Q96SK2 561 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 PKMYT1Q99640 499 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 SYT15Q9BQS2 421 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TMEM175Q9BSA9 504 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 GPR62Q9BZJ7 368 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TSGA10Q9BZW7 698 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 LHX5Q9H2C1 402 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 OSGEPQ9NPF4 335 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 CRTAC1Q9NQ79 661 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 DDX43Q9NXZ2 648 aaKnown RBP8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 CXXC1Q9P0U4 656 aaPredicted RBP8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TJP2Q9UDY2 1190 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 CHORDC1Q9UHD1 332 aaPredicted RBP8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TSPAN16Q9UKR8 245 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 FAN1Q9Y2M0 1017 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 GREB1Q4ZG55 1949 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 A0A0A6YYK5 440 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 M0QYV0 167 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 TULP2O00295 520 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 CLDN5O00501 218 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 MED7O43513 233 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 BUB1O43683 1085 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 EFEMP2O95967 443 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 FGBP02675 491 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 CYP1A2P05177 515 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 LINC00271P0C7V0 271 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 PTPN1P18031 435 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 MMP8P22894 467 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 GPD2P43304 727 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 LHX1P48742 406 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 ETF1P62495 437 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 MDH1BQ5I0G3 518 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 FUT10Q6P4F1 479 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 SYT10Q6XYQ8 523 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 MMS22LQ6ZRQ5 1243 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 PAQR9Q6ZVX9 377 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 PHF13Q86YI8 300 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 CMTR2Q8IYT2 770 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 RNF168Q8IYW5 571 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 DEFB123Q8N688 67 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 TMEM35BQ8NCS4 154 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 RFFLQ8WZ73 363 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 HERVK_113Q902F9 699 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 SECISBP2LQ93073 1101 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF653Q96CK0 615 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 CPXM1Q96SM3 734 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 C11orf70Q9BRQ4 267 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 COLEC11Q9BWP8 271 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 VN1R3Q9BXE9 311 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 PDCL3Q9H2J4 239 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 LUC7LQ9NQ29 371 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 TMLHEQ9NVH6 421 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 GTF3C4Q9UKN8 822 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 CDH9Q9ULB4 789 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 KIAA1257Q9ULG3 409 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 COG5Q9UP83 839 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 MYO16Q9Y6X6 1858 aa8.57□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF638Q14966 1978 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TCRBV5S1A1TA0A578 114 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 MYBPHLA2RUH7 354 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 GRID2IPA4D2P6 1211 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 SOX1O00570 391 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TADA2AO75478 443 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 GJB6O95452 261 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 ERBB2P04626 1255 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 ALDH2P05091 517 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 FGFR3P22607 806 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 RRM1P23921 792 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 ADORA2BP29275 332 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 NSFP46459 744 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 CDR1P51861 262 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 HADHBP55084 474 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 GNG11P61952 73 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 GPC5P78333 572 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 HTRA4P83105 476 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 PDE4CQ08493 712 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 MRPL58Q14197 206 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 TCEAL1Q15170 157 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 STILQ15468 1287 aa8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 INTS6LQ5JSJ4 861 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-207ENST00000549249 OVOS1Q6IE37 1185 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms