RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 ST6GALNAC2Q9UJ37 374 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 NDRG4Q9ULP0 352 aaKnown RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 ZMYND8Q9ULU4 1186 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 MAP3K2Q9Y2U5 619 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 TCAF1Q9Y4C2 921 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 DGKBQ9Y6T7 804 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 RNASET2O00584 256 aaKnown RBP7.49□□□□□ -1.21
LEMD3-206ENST00000545026 ACKR2O00590 384 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 PIP5K1BO14986 540 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 NCR1O76036 304 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 RASAL1O95294 804 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 IDEP14735 1019 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 PPIFP30405 207 aaKnown RBP7.49□□□□□ -1.21
LEMD3-206ENST00000545026 ATICP31939 592 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 NPTX2P47972 431 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 FPGSQ05932 587 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 R3HDM1Q15032 1099 aaKnown RBP7.49□□□□□ -1.21
LEMD3-206ENST00000545026 MAPKAPK3Q16644 382 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 GEN1Q17RS7 908 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 PTCHD3Q3KNS1 767 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 ARHGAP15Q53QZ3 475 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 ZNF585AQ6P3V2 769 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 MICALCLQ6ZW33 695 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 KRT73Q86Y46 540 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 CCDC28AQ8IWP9 274 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 FAM109AQ8N4B1 249 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 FAM71BQ8TC56 605 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 STYXQ8WUJ0 223 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 AKIP1Q9NQ31 210 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 TMEM74BQ9NUR3 256 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 AURKAIP1Q9NWT8 199 aaPredicted RBP7.49□□□□□ -1.21
LEMD3-206ENST00000545026 DACT1Q9NYF0 836 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 LRFN1Q9P244 771 aa7.49□□□□□ -1.21
LEMD3-206ENST00000545026 MYADML2A6NDP7 307 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 PIAS2O75928 621 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 PAX3P23760 479 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 FOXO1Q12778 655 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 PRKD1Q15139 912 aaPredicted RBP7.48□□□□□ -1.21
LEMD3-206ENST00000545026 SLC5A9Q2M3M2 681 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.48□□□□□ -1.21
LEMD3-206ENST00000545026 RBM20Q5T481 1227 aaKnown RBP7.48□□□□□ -1.21
LEMD3-206ENST00000545026 TMTC4Q5T4D3 741 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 VPS53Q5VIR6 699 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 MANEALQ5VSG8 457 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 ARL6IP4Q66PJ3 421 aaKnown RBP7.48□□□□□ -1.21
LEMD3-206ENST00000545026 ZNF354CQ86Y25 554 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 TRAPPC12Q8WVT3 735 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 SNX19Q92543 992 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 TMEM125Q96AQ2 219 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 TMEM120AQ9BXJ8 343 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 TRIM5Q9C035 493 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 ZBTB26Q9HCK0 441 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 SSX2IPQ9Y2D8 614 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 GPR52Q9Y2T5 361 aa7.48□□□□□ -1.21
LEMD3-206ENST00000545026 A0A0B4J269 797 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 F5H697 171 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 PLSCR1O15162 318 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 FAM20BO75063 409 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 CSF1RP07333 972 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 ITGA5P08648 1049 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 ZFP36P26651 326 aaKnown RBP7.47□□□□□ -1.21
LEMD3-206ENST00000545026 PRKAG1P54619 331 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 TUBB3Q13509 450 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 BEAN1Q3B7T3 259 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 PREPLQ4J6C6 727 aaPredicted RBP7.47□□□□□ -1.21
LEMD3-206ENST00000545026 ARHGAP40Q5TG30 622 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 FAXCQ5TGI0 409 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 SP5Q6BEB4 398 aaPredicted RBP7.47□□□□□ -1.21
LEMD3-206ENST00000545026 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 TTC9BQ8N6N2 239 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 DNAJB14Q8TBM8 379 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 TBC1D20Q96BZ9 403 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 RNF31Q96EP0 1072 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 LTV1Q96GA3 475 aaPredicted RBP7.47□□□□□ -1.21
LEMD3-206ENST00000545026 C20orf173Q96LM9 149 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 FAM227BQ96M60 508 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 OSBPL9Q96SU4 736 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 ALOXE3Q9BYJ1 711 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 GALNT9Q9HCQ5 603 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 HPSEQ9Y251 543 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 NOX1Q9Y5S8 564 aa7.47□□□□□ -1.21
LEMD3-206ENST00000545026 TRIM38O00635 465 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 SRGAP2O75044 1071 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 PECAM1P16284 738 aaPredicted RBP7.46□□□□□ -1.22
LEMD3-206ENST00000545026 GATA3P23771 443 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 MST1P26927 711 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 CD6P30203 668 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 VAV2P52735 878 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 RESTQ13127 1097 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 E2F2Q14209 437 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 NFIXQ14938 502 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 SPDYE7PQ495Y7 208 aa7.46□□□□□ -1.22
LEMD3-206ENST00000545026 SFRP4Q6FHJ7 346 aaPredicted RBP7.46□□□□□ -1.22
LEMD3-206ENST00000545026 RGS7BPQ6MZT1 257 aaPredicted RBP7.46□□□□□ -1.22
LEMD3-206ENST00000545026 EID2BQ96D98 161 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms