RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 KRT20P35900 424 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 FBXW4P57775 412 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 STX3Q13277 289 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 UBE2SQ16763 222 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 NAPEPLDQ6IQ20 393 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 CROCCP3Q8IVE0 287 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SEPT1Q8WYJ6 367 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 LXNQ9BS40 222 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 CCDC28BQ9BUN5 200 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 BRD9Q9H8M2 597 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ZNF556Q9HAH1 456 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 RAD54BQ9Y620 910 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 C3orf70A6NLC5 250 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 HACD1B0YJ81 288 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 E2F6O75461 281 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 IFNA14P01570 189 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 YWHABP31946 246 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 VEGFBP49765 207 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 BCAR1P56945 870 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 CCDC153Q494R4 210 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SPRYD7Q5W111 196 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 METTL16Q86W50 562 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ZBED8Q8IZ13 594 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SKA2Q8WVK7 121 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 BHMT2Q9H2M3 363 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SMYD2Q9NRG4 433 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 DISP2A7MBM2 1401 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 GSG1L2A8MUP6 293 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 LRRN2O75325 713 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 NPTXRO95502 500 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 CHN1P15882 459 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 GPD1P21695 349 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ARSEP51690 589 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SRSF11Q05519 484 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ACTN3Q08043 901 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 STX5Q13190 355 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 PROSER3Q2NL68 480 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 COBLL1Q53SF7 1204 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 IQSEC1Q6DN90 963 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ZNF746Q6NUN9 644 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 OR6B3Q8NGW1 331 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 SLC35G2Q8TBE7 412 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 PRMT1Q99873 361 aaKnown RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 MAN1C1Q9NR34 630 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 RAD18Q9NS91 495 aa8.13□□□□□ -1.11
VPS13D-211ENST00000543710 RBAKQ9NYW8 714 aaPredicted RBP8.13□□□□□ -1.11
VPS13D-211ENST00000543710 ADGRA2Q96PE1 1338 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 MOXD2PA6NHM9 499 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 TK2O00142 265 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 WFS1O76024 890 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 ACSL3O95573 720 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CASP6P55212 293 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 ACAD10Q6JQN1 1059 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CYB5D1Q6P9G0 228 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 ADCK1Q86TW2 530 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 AADATQ8N5Z0 425 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 SLITRK1Q96PX8 696 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CLDND1Q9NY35 253 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 AAR2Q9Y312 384 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 GZMAP12544 262 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CALB2P22676 271 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 SOX6P35712 828 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 NUP107P57740 925 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 NAA35Q5VZE5 725 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 ZFP1Q6P2D0 407 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 BBS7Q8IWZ6 715 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 NLGN2Q8NFZ4 835 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 MANSC1Q9H8J5 431 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 SNX24Q9Y343 169 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CLTBP09497 229 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 THRAP10827 490 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 COILP38432 576 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 XIAPP98170 497 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 NCAPHQ15003 741 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 KHDRBS2Q5VWX1 349 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 NFRKBQ6P4R8 1299 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 YTHDF3Q7Z739 585 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 NOA1Q8NC60 698 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 RAPGEF5Q92565 580 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 ULK4Q96C45 1275 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 MTMR12Q9C0I1 747 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 UXTQ9UBK9 157 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 MAD2L2Q9UI95 211 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CDV3Q9UKY7 258 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 MAGED2Q9UNF1 606 aaPredicted RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 PCDHB2Q9Y5E7 798 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 TLL2Q9Y6L7 1015 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 hCG_1642624A0A1W2PR95 340 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 TTC26A0AVF1 554 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CD2BP2O95400 341 aaKnown RBP8.12□□□□□ -1.11
VPS13D-211ENST00000543710 GSNP06396 782 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 GRK2P25098 689 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 VPS41P49754 854 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 PDCLQ13371 301 aa8.12□□□□□ -1.11
VPS13D-211ENST00000543710 CUL3Q13618 768 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms