RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 MMS19Q96T76 1030 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PUS3Q9BZE2 481 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM117Q9H0C3 514 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 MIR1-1HGQ9H1L0 117 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 RNPEPQ9H4A4 650 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 MYH16Q9H6N6 1097 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PANK3Q9H999 370 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 ZFP14Q9HCL3 533 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 MRPL17Q9NRX2 175 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 THSD1Q9NS62 852 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 HOMER2Q9NSB8 354 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 C1orf112Q9NSG2 853 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 GDE1Q9NZC3 331 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 CEP131Q9UPN4 1083 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SSX2IPQ9Y2D8 614 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SQORQ9Y6N5 450 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SONP18583 2426 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 EML5Q05BV3 1969 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 BSNQ9UPA5 3926 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 LAMA4Q16363 1823 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 FLT1P17948 1338 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 A0A1W2PQD8 194 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PI4KAP2A4QPH2 592 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 B4DLN1 442 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 B4E1Z4 1266 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 NT5C1B-RDH14C9J2C7 533 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 K7ESM1 405 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 KCNK3O14649 394 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 SHOX2O60902 331 aaPredicted RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 LDLRP01130 860 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF286BP0CG31 522 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 MYBP10242 640 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PFKLP17858 780 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PSMC3P17980 439 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 KLK2P20151 261 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PROZP22891 400 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PTGER4P35408 488 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 METAP2P50579 478 aaKnown RBP eCLIP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 MRPL12P52815 198 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 CASP7P55210 303 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 BCAR1P56945 870 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PCBP3P57721 371 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 YBX1P67809 324 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 KRT83P78385 493 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 BYSLQ13895 437 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 MORC3Q14149 939 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TARBP2Q15633 366 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TBR1Q16650 682 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TSNAXIP1Q2TAA8 658 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PLEKHG6Q3KR16 790 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TKFCQ3LXA3 575 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 ZSCAN23Q3MJ62 389 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 FAM83BQ5T0W9 1011 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 ADGRF1Q5T601 910 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 HES3Q5TGS1 186 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 FBXL19Q6PCT2 694 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 BHLHB9Q6PI77 547 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 LRRC55Q6ZSA7 311 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM179Q6ZVK1 233 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 SYT13Q7L8C5 426 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 BIVMQ86UB2 503 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 CDH24Q86UP0 819 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TGIF2LYQ8IUE0 185 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PI4KAP1Q8N8J0 262 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 C3orf58Q8NDZ4 430 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 CHDHQ8NE62 594 aaPredicted RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 ITFG1Q8TB96 612 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 STK35Q8TDR2 534 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 CYB5D2Q8WUJ1 264 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PDCD6IPQ8WUM4 868 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM158Q8WZ71 300 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 LPIN2Q92539 896 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 EAF1Q96JC9 268 aaPredicted RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM87BQ96K49 555 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 SPRTNQ9H040 489 aaPredicted RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 FAM124BQ9H5Z6 455 aaPredicted RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 AGO3Q9H9G7 860 aaKnown RBP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 SLC38A10Q9HBR0 1119 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PRDM8Q9NQV8 689 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TM7SF3Q9NS93 570 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 SMC4Q9NTJ3 1288 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM161AQ9NX61 479 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 CYP39A1Q9NYL5 469 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 ZMYM5Q9UJ78 669 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PADI3Q9ULW8 664 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.54□□□□□ -2
TRAV1-1-201ENST00000542354 KNSTRNQ9Y448 316 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 PCDHGB2Q9Y5G2 931 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 CACNA1FO60840 1977 aa2.54□□□□□ -2
TRAV1-1-201ENST00000542354 ABCA4P78363 2273 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 ATXN2Q99700 1313 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 FANCIQ9NVI1 1328 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 LOXHD1Q8IVV2 1947 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MYBPHLA2RUH7 354 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 DENND3A2RUS2 1198 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SLC22A31A6NKX4 558 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 SPECC1L-ADORA2AF8WAN1 911 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 AP5Z1O43299 807 aa2.53□□□□□ -2
TRAV1-1-201ENST00000542354 MSI1O43347 362 aaKnown RBP2.53□□□□□ -2
TRAV1-1-201ENST00000542354 PRICKLE3O43900 615 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms