RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 COL4A3Q01955 1670 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 A0A1W2PRU2 124 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 FAM163BP0C2L3 166 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 HMGA1P17096 107 aaKnown RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 PTPN2P17706 415 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 GRIK1P39086 918 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 TUFMP49411 452 aaKnown RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 COPB1P53618 953 aaKnown RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 USP46P62068 366 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 CYP4F8P98187 520 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 KCNMA1Q12791 1236 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 CETN1Q12798 172 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 SMARCB1Q12824 385 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 IFRD2Q12894 506 aaPredicted RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 IQCB1Q15051 598 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 TEAD2Q15562 447 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 MAPRE1Q15691 268 aaKnown RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 SKOR2Q2VWA4 1001 aaPredicted RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 PDZD4Q76G19 769 aaPredicted RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 GJD3Q8N144 294 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 ELMOD1Q8N336 334 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 ZMIZ2Q8NF64 920 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 FGF13Q92913 245 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 FUBP3Q96I24 572 aaKnown RBP eCLIP14.9□□□□□ -0.02
VPS11-205ENST00000534551 ZNF512Q96ME7 567 aaPredicted RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 KCNK16Q96T55 309 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 BPIFA3Q9BQP9 254 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 LSM14BQ9BX40 385 aaKnown RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 HSFX1Q9UBD0 423 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 PRKAG3Q9UGI9 489 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 MRPS23Q9Y3D9 190 aaKnown RBP14.9□□□□□ -0.02
VPS11-205ENST00000534551 PCDHB4Q9Y5E5 795 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 NCANO14594 1321 aa14.9□□□□□ -0.02
VPS11-205ENST00000534551 SLC38A8A6NNN8 435 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 RNF225M0QZC1 329 aaPredicted RBP14.89□□□□□ -0.03
VPS11-205ENST00000534551 AP1G2O75843 785 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 LETM1O95202 739 aaPredicted RBP14.89□□□□□ -0.03
VPS11-205ENST00000534551 TBXAS1P24557 533 aaPredicted RBP14.89□□□□□ -0.03
VPS11-205ENST00000534551 GABRR2P28476 465 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 MAGEA11P43364 429 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 EPHA5P54756 1037 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 ARHGAP44Q17R89 818 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 PPP1R26Q5T8A7 1209 aaPredicted RBP14.89□□□□□ -0.03
VPS11-205ENST00000534551 IQCEQ6IPM2 695 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 DPY19L2P1Q6NXN4 242 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 TMEM270Q6UE05 265 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 CYP26C1Q6V0L0 522 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 GAREM2Q75VX8 874 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 GPRIN1Q7Z2K8 1008 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 GPIHBP1Q8IV16 184 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 CRYBG2Q8N1P7 616 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 RSAD2Q8WXG1 361 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 SMARCD1Q96GM5 515 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 ZSWIM3Q96MP5 696 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 SMOQ99835 787 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 ZSWIM1Q9BR11 485 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 NAT10Q9H0A0 1025 aaKnown RBP14.89□□□□□ -0.03
VPS11-205ENST00000534551 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
VPS11-205ENST00000534551 ACP6Q9NPH0 428 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 APEX2Q9UBZ4 518 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 MUTYHQ9UIF7 546 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 FHOD1Q9Y613 1164 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 TICRRQ7Z2Z1 1910 aa14.89□□□□□ -0.03
VPS11-205ENST00000534551 GTPBP10A4D1E9 387 aaKnown RBP14.88□□□□□ -0.03
VPS11-205ENST00000534551 EPHB6O15197 1021 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 NOL4O94818 638 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 BRD2P25440 801 aaKnown RBP14.88□□□□□ -0.03
VPS11-205ENST00000534551 GCNT1Q02742 428 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 GOLGA7BQ2TAP0 167 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 VSTM1Q6UX27 236 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 TMEM150AQ86TG1 271 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 RBBP8NLQ8NC74 664 aaPredicted RBP14.88□□□□□ -0.03
VPS11-205ENST00000534551 TFAP2BQ92481 460 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 MCRS1Q96EZ8 462 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 CYFIP2Q96F07 1278 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 TMEM176AQ96HP8 235 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 HEXIM2Q96MH2 286 aaKnown RBP14.88□□□□□ -0.03
VPS11-205ENST00000534551 LIMD1Q9UGP4 676 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 LIMA1Q9UHB6 759 aaKnown RBP14.88□□□□□ -0.03
VPS11-205ENST00000534551 CDH7Q9ULB5 785 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 NR2E1Q9Y466 385 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 COL4A2P08572 1712 aa14.88□□□□□ -0.03
VPS11-205ENST00000534551 LGALS16A8MUM7 142 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 BECN2A8MW95 431 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 TRIM66O15016 1216 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 KRT5P13647 590 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 CD19P15391 556 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 ANXA13P27216 316 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 ZNF132P52740 706 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 MAP3K7CLP57077 242 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 RPL10AP62906 217 aaKnown RBP14.87□□□□□ -0.03
VPS11-205ENST00000534551 CLEC20AQ6ZU45 233 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 OTOP3Q7RTS5 596 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 ITIH5Q86UX2 942 aa14.87□□□□□ -0.03
VPS11-205ENST00000534551 FAXDC2Q96IV6 333 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms