RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 RINT1Q6NUQ1 792 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 MTFR2Q6P444 385 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 INO80CQ6PI98 192 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 KDELC1Q6UW63 502 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 DENND5BQ6ZUT9 1274 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 GPR149Q86SP6 731 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 CCDC28AQ8IWP9 274 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 TBC1D21Q8IYX1 336 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 AGGF1Q8N302 714 aaeCLIP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 WDTC1Q8N5D0 677 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 ZNF540Q8NDQ6 660 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 ANKRD20A12PQ8NF67 263 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 GABPB2Q8TAK5 448 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 PLEKHO2Q8TD55 490 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 DENND1AQ8TEH3 1009 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 CPT1BQ92523 772 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 ATP6V0A1Q93050 837 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 PTP4A1Q93096 173 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 PGAP3Q96FM1 320 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 VPS33BQ9H267 617 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 VPS16Q9H269 839 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 RANBP17Q9H2T7 1088 aaKnown RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 SLAMF7Q9NQ25 335 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 C5AR2Q9P296 337 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 UBA2Q9UBT2 640 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 KCND3Q9UK17 655 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 FBXL5Q9UKA1 691 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 CORO1CQ9ULV4 474 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 TRIM17Q9Y577 477 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 RPTORQ8N122 1335 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 MYBBP1AQ9BQG0 1328 aaKnown RBP4.94□□□□□ -1.62
C11orf54-213ENST00000533585 ATAD2BQ9ULI0 1458 aa4.94□□□□□ -1.62
C11orf54-213ENST00000533585 A0A0A6YYJ9 748 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CDC14CA4D256 554 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TMEM233B4DJY2 109 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 H0YAE9 185 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 M0R082 166 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 RAB27BO00194 218 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TNPO2O14787 897 aaKnown RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PCDH17O14917 1159 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 HGSO14964 777 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PPP1R11O60927 126 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PPP6R2O75170 966 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 COQ9O75208 318 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SEC22BO75396 215 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 DEAF1O75398 565 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CSPG5O95196 566 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 NTSR2O95665 410 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TFRCP02786 760 aaKnown RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 RPS2P15880 293 aaKnown RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 BTF3P20290 206 aaKnown RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SAT1P21673 171 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 KLRK1P26718 216 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SERPINA4P29622 427 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TCF7P36402 384 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PPARGP37231 505 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 GP5P40197 560 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CAPZA2P47755 286 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 RAC1P63000 192 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PRR20EP86478 221 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PRR20CP86479 221 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PRR20DP86480 221 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PRR20BP86481 221 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PRR20AP86496 221 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TEKQ02763 1124 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 ACTN3Q08043 901 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 KIAA2012Q0VF49 1180 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 EIF2B5Q13144 721 aaKnown RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CDK5R2Q13319 367 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SLC14A1Q13336 389 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 NFE2L1Q14494 772 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SLC29A2Q14542 456 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 WSCD2Q2TBF2 565 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 EMC4Q5J8M3 183 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TTC22Q5TAA0 569 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 FAXCQ5TGI0 409 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 MRNIPQ6NTE8 343 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TAF2Q6P1X5 1199 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 WDR73Q6P4I2 378 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 RNF111Q6ZNA4 994 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 FAM83HQ6ZRV2 1179 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 C8orf86Q6ZUL3 223 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CCDC186Q7Z3E2 898 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 RASGRP3Q8IV61 690 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 TRIM48Q8IWZ4 208 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SP8Q8IXZ3 490 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SLC15A4Q8N697 577 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 AOPEPQ8N6M6 819 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 DNAJC5GQ8N7S2 189 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 AGBL5Q8NDL9 886 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 GIMAP7Q8NHV1 300 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 ZNF417Q8TAU3 575 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 PHOSPHO1Q8TCT1 267 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CALML6Q8TD86 181 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 ZNF606Q8WXB4 792 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 HOXB13Q92826 284 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-213ENST00000533585 SPSB4Q96A44 273 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 RMDN1Q96DB5 314 aa4.93□□□□□ -1.62
C11orf54-213ENST00000533585 CYFIP2Q96F07 1278 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms