RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 IRF7Q92985 503 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 BORCS6Q96GS4 357 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 CNOT6LQ96LI5 555 aaKnown RBP10.06□□□□□ -0.8
VPS26B-207ENST00000532160 FNBP1Q96RU3 617 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 CGRRF1Q99675 332 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 LRRC3Q9BY71 257 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 ASB7Q9H672 318 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 PLEKHA5Q9HAU0 1116 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 TRPV4Q9HBA0 871 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 SPTLC3Q9NUV7 552 aa10.06□□□□□ -0.8
VPS26B-207ENST00000532160 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
VPS26B-207ENST00000532160 KIF26AQ9ULI4 1882 aaPredicted RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 A0A1W2PRU2 124 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 SLC16A3O15427 465 aaKnown RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 OAZ2O95190 189 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 KRT13P13646 458 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 TGM1P22735 817 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 GCLMP48507 274 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 YWHAHQ04917 246 aaPredicted RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 DUSP4Q13115 394 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 GAS6Q14393 721 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 ZBTB6Q15916 424 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 LPAL2Q16609 132 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 FOXR2Q6PJQ5 311 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 INTS8Q75QN2 995 aaKnown RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 MFSD6LQ8IWD5 586 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 CD302Q8IX05 232 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 DEPDC1BQ8WUY9 529 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 TMEM209Q96SK2 561 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 MKNK1Q9BUB5 465 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 HSD3B7Q9H2F3 369 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 PDCL3Q9H2J4 239 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 THAP9Q9H5L6 903 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 SLITRK6Q9H5Y7 841 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 LMAN1LQ9HAT1 526 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 PARD6AQ9NPB6 346 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 TRPV5Q9NQA5 729 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 ARMCX3Q9UH62 379 aaPredicted RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 MAFFQ9ULX9 164 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 UBQLN1Q9UMX0 589 aaKnown RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 CNOT1A5YKK6 2376 aaKnown RBP10.05□□□□□ -0.8
VPS26B-207ENST00000532160 RALGAPA1Q6GYQ0 2036 aa10.05□□□□□ -0.8
VPS26B-207ENST00000532160 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ATG2BQ96BY7 2078 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MTMR11A4FU01 709 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 SLC38A8A6NNN8 435 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 BECN2A8MW95 431 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 KCNJ18B7U540 433 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ZNF263O14978 683 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MAPK13O15264 365 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MAP3K13O43283 966 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 SOAT2O75908 522 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 FGFR1OPO95684 399 aaKnown RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ITGB3P05106 788 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 KRT19P08727 400 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 CHRNB1P11230 501 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 SOX9P48436 509 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 CDR1P51861 262 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ATXN1P54253 815 aaKnown RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 SATB1Q01826 763 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 DMWDQ09019 674 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 BIRC3Q13489 604 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 KCNJ12Q14500 433 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 SURF1Q15526 300 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 GAREM2Q75VX8 874 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 WDR49Q8IV35 697 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ATAD1Q8NBU5 361 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 LEMD2Q8NC56 503 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MRFAP1L1Q96HT8 127 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 ANKRD36BP1Q96IX9 119 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 LRRC3BQ96PB8 259 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 BPIFA3Q9BQP9 254 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 FAM126AQ9BYI3 521 aaPredicted RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 RBM12Q9NTZ6 932 aaKnown RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 DPP3Q9NY33 737 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 TAB2Q9NYJ8 693 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
VPS26B-207ENST00000532160 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.04□□□□□ -0.8
VPS26B-207ENST00000532160 MAP1BP46821 2468 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms