RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SNX25Q9H3E2 840 aa17.75■□□□□ 0.43
SREK1-212ENST00000522912 MED4Q9NPJ6 270 aa17.75■□□□□ 0.43
SREK1-212ENST00000522912 ZDHHC18Q9NUE0 388 aa17.75■□□□□ 0.43
SREK1-212ENST00000522912 PTPN22Q9Y2R2 807 aa17.75■□□□□ 0.43
SREK1-212ENST00000522912 HUS1O60921 280 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 CCDC130P13994 396 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 IL1R2P27930 398 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 RPL21P46778 160 aaKnown RBP17.74■□□□□ 0.43
SREK1-212ENST00000522912 PDE4CQ08493 712 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 TRNP1Q6NT89 227 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 MRPL10Q7Z7H8 261 aaKnown RBP17.74■□□□□ 0.43
SREK1-212ENST00000522912 ADGRF2Q8IZF7 708 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 FAM71BQ8TC56 605 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 PIK3R5Q8WYR1 880 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
SREK1-212ENST00000522912 SETSIPP0DME0 302 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 KRT10P13645 584 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 DSC3Q14574 896 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 HSP90B2PQ58FF3 399 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 ZFYVE27Q5T4F4 411 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 ALS2CLQ60I27 953 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 SPOCD1Q6ZMY3 1216 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 HACE1Q8IYU2 909 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 IQCKQ8N0W5 287 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 SLCO2A1Q92959 643 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
SREK1-212ENST00000522912 GRHL1Q9NZI5 618 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 HESX1Q9UBX0 185 aa17.74■□□□□ 0.43
SREK1-212ENST00000522912 ARL5CA6NH57 179 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 CABYRO75952 493 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 ECEL1O95672 775 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 THP07101 528 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 WARSP23381 471 aaKnown RBP17.73■□□□□ 0.43
SREK1-212ENST00000522912 APLP1P51693 650 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 FAM26DQ5JW98 314 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 ZDHHC24Q6UX98 284 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 POLNQ7Z5Q5 900 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 TMEM110Q86TL2 294 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 TOP6BLQ8N6T0 577 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 ZIM3Q96PE6 472 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 MIS12Q9H081 205 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 ZWILCHQ9H900 591 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 SLC38A7Q9NVC3 462 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 DDX56Q9NY93 547 aaKnown RBP17.73■□□□□ 0.43
SREK1-212ENST00000522912 FAN1Q9Y2M0 1017 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 GIT1Q9Y2X7 761 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 BRCA2P51587 3418 aa17.73■□□□□ 0.43
SREK1-212ENST00000522912 C3orf70A6NLC5 250 aaPredicted RBP17.72■□□□□ 0.43
SREK1-212ENST00000522912 C2CD4BA6NLJ0 364 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 CYB561D2O14569 222 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 HSF2BPO75031 334 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 ADORA2BP29275 332 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 CETN2P41208 172 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 GYS2P54840 703 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 COPS2P61201 443 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 KAZNQ674X7 775 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 ANKRD52Q8NB46 1076 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.431e-7■■■□□ 15.6
SREK1-212ENST00000522912 FAM118BQ9BPY3 351 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 CEP350Q5VT06 3117 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 FRMPD3Q5JV73 1810 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 ZNF623O75123 536 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 GRAP2O75791 330 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 PTPN7P35236 360 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 CDKN2BP42772 138 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 SCNN1GP51170 649 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 ZNF143P52747 638 aaPredicted RBP17.72■□□□□ 0.43
SREK1-212ENST00000522912 PLTPP55058 493 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 GABPB1Q06547 395 aaPredicted RBP17.72■□□□□ 0.43
SREK1-212ENST00000522912 TAF5Q15542 800 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 UAP1Q16222 522 aaPredicted RBP17.72■□□□□ 0.43
SREK1-212ENST00000522912 CCNG2Q16589 344 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 SMTNL2Q2TAL5 461 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 CFAP58Q5T655 872 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 SH3PXD2AQ5TCZ1 1133 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 WSCD1Q658N2 575 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 LHX8Q68G74 356 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 OLFML1Q6UWY5 402 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 STK32AQ8WU08 396 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 RXFP2Q8WXD0 754 aa17.72■□□□□ 0.43
SREK1-212ENST00000522912 TDRD15B5MCY1 1934 aaKnown RBP17.72■□□□□ 0.43
SREK1-212ENST00000522912 hCG_1818297A0A087WSY0 165 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 LRRD1A4D1F6 860 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 PAPSS1O43252 624 aaPredicted RBP17.71■□□□□ 0.43
SREK1-212ENST00000522912 ATP2C2O75185 946 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 INHAP05111 366 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 GPD1P21695 349 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 MIPP30301 263 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 CLCNKBP51801 687 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 KRT17Q04695 432 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 ACAP1Q15027 740 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 HADHQ16836 314 aaKnown RBP17.71■□□□□ 0.43
SREK1-212ENST00000522912 CCDC142Q17RM4 750 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 RAB6CQ53S08 254 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 KCNT1Q5JUK3 1230 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 SCUBE3Q8IX30 993 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 FBXO25Q8TCJ0 367 aa17.71■□□□□ 0.43
SREK1-212ENST00000522912 FMO2Q99518 471 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms