RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CIZ1Q9ULV3 898 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-236ENST00000498808 DERAQ9Y315 318 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 PCDHB6Q9Y5E3 794 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 IGSF10Q6WRI0 2623 aa16.82■□□□□ 0.28
HDAC6-236ENST00000498808 SETXQ7Z333 2677 aaKnown RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 C2orf78A6NCI8 922 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 H0YCG3 227 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 MAP3K13O43283 966 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 ALDH1A2O94788 518 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 NFATC1O95644 943 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 TCF3P15923 654 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 ITPKAP23677 461 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 CYP2F1P24903 491 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 TOB1P50616 345 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 ANAPC15P60006 121 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 MRPS21P82921 87 aaKnown RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 MESP2Q0VG99 397 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 SCAPQ12770 1279 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 ZRSR1Q15695 479 aaKnown RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 COL28A1Q2UY09 1125 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 MAP7D1Q3KQU3 841 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 LYSMD4Q5XG99 296 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 ALLCQ8N6M5 410 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 IL17RCQ8NAC3 791 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 WHAMMQ8TF30 809 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 LRRC15Q8TF66 581 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 LEO1Q8WVC0 666 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 SPACA7Q96KW9 195 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 MSTO1Q9BUK6 570 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 LARSQ9P2J5 1176 aaKnown RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
HDAC6-236ENST00000498808 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 CELSR3Q9NYQ7 3312 aa16.81■□□□□ 0.28
HDAC6-236ENST00000498808 ACACAQ13085 2346 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 SGK1O00141 431 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 CFIP05156 583 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 ZXDBP98169 803 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 TSPY1Q01534 308 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-236ENST00000498808 CCDC142Q17RM4 750 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 ARSHQ5FYA8 562 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 HYIQ5T013 277 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 HDDC3Q8N4P3 179 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 TXNDC5Q8NBS9 432 aaKnown RBP16.8■□□□□ 0.28
HDAC6-236ENST00000498808 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 PLIN2Q99541 437 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 GTPBP2Q9BX10 602 aaKnown RBP16.8■□□□□ 0.28
HDAC6-236ENST00000498808 ASB7Q9H672 318 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 SLC6A14Q9UN76 642 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 ARHGAP26Q9UNA1 814 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 CEP192Q8TEP8 1941 aa16.8■□□□□ 0.28
HDAC6-236ENST00000498808 APC2O95996 2303 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 PLXNB3Q9ULL4 1909 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 KPNA7A9QM74 516 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 KLF8O95600 359 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-236ENST00000498808 CYP17A1P05093 508 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 CD59P13987 128 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
HDAC6-236ENST00000498808 HOXD12P35452 270 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 DPP6P42658 865 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 ACOT2P49753 483 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 ATXN3P54252 364 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-236ENST00000498808 RPL10AP62906 217 aaKnown RBP16.79■□□□□ 0.28
HDAC6-236ENST00000498808 ZNF423Q2M1K9 1284 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 SPDYCQ5MJ68 293 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 OR2I1PQ8NGU4 316 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 BBC3Q96PG8 261 aaPredicted RBP16.79■□□□□ 0.28
HDAC6-236ENST00000498808 PKMYT1Q99640 499 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 CAPN10Q9HC96 672 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 KCND2Q9NZV8 630 aa16.79■□□□□ 0.28
HDAC6-236ENST00000498808 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
HDAC6-236ENST00000498808 MYOFQ9NZM1 2061 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 TISP43B9A030 160 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 K7ENM7 598 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 OPHN1O60890 802 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 ADAM23O75077 832 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 ZIC2O95409 532 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-236ENST00000498808 SEC24BO95487 1268 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 PLA2G4BP0C869 781 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 TIE1P35590 1138 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 PRPHP41219 470 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 SLC6A11P48066 632 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
HDAC6-236ENST00000498808 KCNB1Q14721 858 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 DUOXA1Q1HG43 343 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 SV2CQ496J9 727 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 EMC10Q5UCC4 262 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 LMBRD2Q68DH5 695 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-236ENST00000498808 PDCL2Q8N4E4 241 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 HMGB4Q8WW32 186 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 POLMQ9NP87 494 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-236ENST00000498808 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
HDAC6-236ENST00000498808 L1RE1Q9UN81 338 aa16.78■□□□□ 0.28
HDAC6-236ENST00000498808 ANKRD63C9JTQ0 380 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 SERPINF2P08697 491 aa16.77■□□□□ 0.28
HDAC6-236ENST00000498808 HDCP19113 662 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms