RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 LIG3P49916 1009 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 YWHAEP62258 255 aaKnown RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 HTRA3P83110 453 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 NME3Q13232 169 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 FAM110CQ1W6H9 321 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 TRNP1Q6NT89 227 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 ZNF677Q86XU0 584 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 ATL2Q8NHH9 583 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 WNT8BQ93098 351 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 GAD1Q99259 594 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 NT5C1AQ9BXI3 368 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 MAK16Q9BXY0 300 aaKnown RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 PABPC3Q9H361 631 aaKnown RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 KIF9Q9HAQ2 790 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 H7C0C1 242 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 CETN2P41208 172 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 ATP5OP48047 213 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 MYO1EQ12965 1108 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 XYLT1Q86Y38 959 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 PYROXD2Q8N2H3 581 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 CCDC89Q8N998 374 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 TRIM11Q96F44 468 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 PGLYRP2Q96PD5 576 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 RBM15Q96T37 977 aaKnown RBP eCLIP12.56□□□□□ -0.41e-8■■■■■ 45.2
HCN3-204ENST00000496230 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 EPB41L4BQ9H329 900 aa12.56□□□□□ -0.4
HCN3-204ENST00000496230 ALG13Q9NP73 1137 aaKnown RBP12.56□□□□□ -0.4
HCN3-204ENST00000496230 PODXLO00592 558 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 VIMP08670 466 aaKnown RBP12.55□□□□□ -0.4
HCN3-204ENST00000496230 F7P08709 466 aaPredicted RBP12.55□□□□□ -0.4
HCN3-204ENST00000496230 MLH1P40692 756 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 PITX1P78337 314 aaPredicted RBP12.55□□□□□ -0.4
HCN3-204ENST00000496230 IFT88Q13099 833 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 CA9Q16790 459 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 TTC30AQ86WT1 665 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.55□□□□□ -0.4
HCN3-204ENST00000496230 NUDT5Q9UKK9 219 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 MFHAS1Q9Y4C4 1052 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 SMIM28A0A1B0GU29 152 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 CSPG5O95196 566 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 MYBL1P10243 752 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 MCF2P10911 925 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 FGFR1P11362 822 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 ZNF132P52740 706 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 KRT81Q14533 505 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 SNX17Q15036 470 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 TMED2Q15363 201 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 FSCN1Q16658 493 aaKnown RBP12.55□□□□□ -0.4
HCN3-204ENST00000496230 QPCTQ16769 361 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 BBS9Q3SYG4 887 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 FAM131BQ86XD5 332 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 UNC45BQ8IWX7 931 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 CYP4X1Q8N118 509 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 PEBP4Q96S96 227 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 PRMT1Q99873 361 aaKnown RBP12.55□□□□□ -0.4
HCN3-204ENST00000496230 MED10Q9BTT4 135 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 AAASQ9NRG9 546 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 PCYOX1Q9UHG3 505 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 USP18Q9UMW8 372 aa12.55□□□□□ -0.4
HCN3-204ENST00000496230 TCRBV7S3A2A0A539 114 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 WDR91A4D1P6 747 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 RIPK2O43353 540 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 GHRP10912 638 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 GPD2P43304 727 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 SOWAHAQ2M3V2 549 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 ANKRD22Q5VYY1 191 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 CPLX4Q7Z7G2 160 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 SPATA18Q8TC71 538 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
HCN3-204ENST00000496230 SNF8Q96H20 258 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 AVENQ9NQS1 362 aaPredicted RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 TTC3P53804 2025 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 ARID2Q68CP9 1835 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 MYO7AQ13402 2215 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 GAS2O43903 313 aaKnown RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 TJP3O95049 919 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 CHN1P15882 459 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 GNL1P36915 607 aaPredicted RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 SLC1A1P43005 524 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 PSEN2P49810 448 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 BCAR1P56945 870 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
HCN3-204ENST00000496230 TRIM72Q6ZMU5 477 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 ANKRD23Q86SG2 305 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 SHCBP1Q8NEM2 672 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 MGAMO43451 1857 aa12.54□□□□□ -0.4
HCN3-204ENST00000496230 TP73O15350 636 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms