RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 NDRG4Q9ULP0 352 aaKnown RBP4.73□□□□□ -1.65
CLK1-213ENST00000492793 SPATA31A3Q5VYP0 1347 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 PODXLO00592 558 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 CCP110O43303 1012 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 NDST3O95803 873 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 PPP3CBP16298 524 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 PRKAR1BP31321 381 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 BMPR1AP36894 532 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 DGKEP52429 567 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 KCNAB1Q14722 419 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 SF3B3Q15393 1217 aaKnown RBP4.72□□□□□ -1.65
CLK1-213ENST00000492793 MPEG1Q2M385 716 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 ANO1Q5XXA6 986 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 ICE2Q659A1 982 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 PGBD2Q6P3X8 592 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 LCORLQ8N3X6 602 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 ZNF527Q8NB42 609 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 DNAJB14Q8TBM8 379 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 SSH3Q8TE77 659 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 ZC3H10Q96K80 434 aaKnown RBP4.72□□□□□ -1.65
CLK1-213ENST00000492793 NELL2Q99435 816 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 ADAM2Q99965 735 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 C1QTNF3Q9BXJ4 246 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLK1-213ENST00000492793 CXorf36Q9H7Y0 433 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 GBA2Q9HCG7 927 aaPredicted RBP4.72□□□□□ -1.65
CLK1-213ENST00000492793 FZD1Q9UP38 647 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 RIPOR2Q9Y4F9 1068 aa4.72□□□□□ -1.65
CLK1-213ENST00000492793 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLK1-213ENST00000492793 CENPVL1A0A0U1RR11 272 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 AQP7P3A6NL99 342 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 ADAMTS3O15072 1205 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 PPM1DO15297 605 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 RRP9O43818 475 aaKnown RBP4.71□□□□□ -1.66
CLK1-213ENST00000492793 ADORA2AP29274 412 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 MTHFSP49914 203 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 FOXE3Q13461 319 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 PTPAQ15257 358 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 PTCHD3Q3KNS1 767 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 LY6G5CQ5SRR4 150 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 SP5Q6BEB4 398 aaPredicted RBP4.71□□□□□ -1.66
CLK1-213ENST00000492793 PLAG1Q6DJT9 500 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 CRTC1Q6UUV9 634 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 CATSPERGQ6ZRH7 1159 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 TSHZ1Q6ZSZ6 1077 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 GPR149Q86SP6 731 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 CACTINQ8WUQ7 758 aaKnown RBP4.71□□□□□ -1.66
CLK1-213ENST00000492793 LTV1Q96GA3 475 aaPredicted RBP4.71□□□□□ -1.66
CLK1-213ENST00000492793 EIF2AQ9BY44 585 aaKnown RBP4.71□□□□□ -1.66
CLK1-213ENST00000492793 WDR11Q9BZH6 1224 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 WDR12Q9GZL7 423 aaKnown RBP4.71□□□□□ -1.66
CLK1-213ENST00000492793 AS3MTQ9HBK9 375 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 PTPRHQ9HD43 1115 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 XPNPEP3Q9NQH7 507 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 TMEM74BQ9NUR3 256 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 SLC39A10Q9ULF5 831 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 CDY1Q9Y6F8 540 aa4.71□□□□□ -1.66
CLK1-213ENST00000492793 FER1L4A9Z1Z3 1794 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 FAM234BA2RU67 622 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 TMEM200CA6NKL6 621 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 MARCH11A6NNE9 402 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 AREL1O15033 823 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 FFAR2O15552 330 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 COQ9O75208 318 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 TCEA3O75764 348 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 EIF3JO75822 258 aaKnown RBP4.7□□□□□ -1.66
CLK1-213ENST00000492793 A1BGP04217 495 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 CHRM2P08172 466 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 PDHA1P08559 390 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 KCNA3P22001 575 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 ZFP36P26651 326 aaKnown RBP4.7□□□□□ -1.66
CLK1-213ENST00000492793 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
CLK1-213ENST00000492793 ATICP31939 592 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 IL6STP40189 918 aaPredicted RBP4.7□□□□□ -1.66
CLK1-213ENST00000492793 ICA1Q05084 483 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 PDCD2Q16342 344 aaPredicted RBP4.7□□□□□ -1.66
CLK1-213ENST00000492793 CCDC174Q6PII3 467 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 TMPRSS9Q7Z410 1059 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 OSCP1Q8WVF1 389 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 ASB10Q8WXI3 467 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 LPIN2Q92539 896 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 TMEM41AQ96HV5 264 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 FBXL20Q96IG2 436 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 SNX27Q96L92 541 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 OSBPL9Q96SU4 736 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 CHMP4AQ9BY43 222 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 AMBRA1Q9C0C7 1298 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 CCNL1Q9UK58 526 aaPredicted RBP4.7□□□□□ -1.66
CLK1-213ENST00000492793 HPSEQ9Y251 543 aa4.7□□□□□ -1.66
CLK1-213ENST00000492793 A0A087WV62 115 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 B8ZZF3 427 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 IFRD1O00458 451 aaPredicted RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 HNRNPDLO14979 420 aaKnown RBP4.69□□□□□ -1.66
CLK1-213ENST00000492793 PEX1O43933 1283 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 NBNO60934 754 aa4.69□□□□□ -1.66
CLK1-213ENST00000492793 PEX11BO96011 259 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms