RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 GRIK1P39086 918 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 USP8P40818 1118 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 STAT1P42224 750 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 CDR1P51861 262 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 EPHB3P54753 998 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 PLCB2Q00722 1185 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 LEXMQ3ZCV2 418 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 CES5AQ6NT32 575 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 LCLAT1Q6UWP7 414 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 TMC5Q6UXY8 1006 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 ANKRD52Q8NB46 1076 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 TFAP2BQ92481 460 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 DUSP16Q9BY84 665 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 TRIM5Q9C035 493 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 TSPAN16Q9UKR8 245 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 A0A1W2PQJ5 194 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 H3BQ06 376 aaPredicted RBP20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 AP1G2O75843 785 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 SOAT2O75908 522 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 FAM200BP0CF97 657 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ADORA2BP29275 332 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 GNA15P30679 374 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 MEA1Q16626 185 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 DDR2Q16832 855 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ATAT1Q5SQI0 421 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ITIH5Q86UX2 942 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 SCN4BQ8IWT1 228 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ELMOD1Q8N336 334 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ZNF606Q8WXB4 792 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 BAP1Q92560 729 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 PSMG2Q969U7 264 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ZNF512Q96ME7 567 aaPredicted RBP20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 ZSWIM1Q9BR11 485 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 UBXN6Q9BZV1 441 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 DMAP1Q9NPF5 467 aaPredicted RBP20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 KRT82Q9NSB4 513 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 TMEM30AQ9NV96 361 aa20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.53■□□□□ 0.88
PCOLCE-208ENST00000487172 F8VP50 259 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 CCL16O15467 120 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 MED7O43513 233 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 PNMA6AP0CW24 399 aaPredicted RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 CSH1P0DML2 217 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 CSH2P0DML3 217 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 NPR3P17342 541 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 PTPN2P17706 415 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 BRD2P25440 801 aaKnown RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 ANXA13P27216 316 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 CACNA2D1P54289 1103 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 SMAD4Q13485 552 aaKnown RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 VEPH1Q14D04 833 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 PUS10Q3MIT2 529 aaKnown RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 PKDCCQ504Y2 493 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 CLEC20AQ6ZU45 233 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 DNAJB7Q7Z6W7 309 aaPredicted RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 FMNL3Q8IVF7 1028 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 VSTM4Q8IW00 320 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 ZMIZ2Q8NF64 920 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 SUSD6Q92537 303 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 SMG7Q92540 1137 aaKnown RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 RIPOR3Q96MK2 946 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 SMOQ99835 787 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 PIDD1Q9HB75 910 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 PNPLA8Q9NP80 782 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 AVENQ9NQS1 362 aaPredicted RBP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 HESX1Q9UBX0 185 aa20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCOLCE-208ENST00000487172 MBTPS2O43462 519 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 BEST1O76090 585 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 MTHFRP42898 656 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 GPR15P49685 360 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 EPHA5P54756 1037 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 GOLGA7BQ2TAP0 167 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 SPECC1LQ69YQ0 1117 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 SLC47A2Q86VL8 602 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 TTC30AQ86WT1 665 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 LEMD2Q8NC56 503 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 MRFAP1L1Q96HT8 127 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 KCNK16Q96T55 309 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 ACP6Q9NPH0 428 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 THEGQ9P2T0 379 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 DNMT3BQ9UBC3 853 aaKnown RBP20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 CAPN11Q9UMQ6 739 aa20.51■□□□□ 0.87
PCOLCE-208ENST00000487172 MYH10P35580 1976 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 C2orf16Q68DN1 1984 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 THAP12O43422 761 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 GFPT2O94808 682 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 CALCAP01258 141 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 CCDC172P0C7W6 258 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 SETSIPP0DME0 302 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 CYP11B1P15538 503 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 ZNF75DP51815 510 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 BCAT1P54687 386 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 MAP3K7CLP57077 242 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 SLC8A3P57103 927 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 DENND5BQ6ZUT9 1274 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 ZNF677Q86XU0 584 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 FEZF2Q8TBJ5 459 aa20.5■□□□□ 0.87
PCOLCE-208ENST00000487172 GIPC2Q8TF65 315 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms