RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 B5MCH6 92 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 M0QYG6 137 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 MATN2O00339 956 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 CCP110O43303 1012 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 TIMM44O43615 452 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 FAM155BO75949 473 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 GLP2RO95838 553 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 C1SP09871 688 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 CKMT1AP12532 417 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 NPPBP16860 134 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 BTF3P20290 206 aaKnown RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 VIPR2P41587 438 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 PAPOLAP51003 745 aaKnown RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 INHBEP58166 350 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 ATP2C1P98194 919 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 TCF15Q12870 199 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 FOXL1Q12952 345 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 MRPL49Q13405 166 aaKnown RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 SLC29A2Q14542 456 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 GRM7Q14831 915 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 MAPKAPK3Q16644 382 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 FAM110CQ1W6H9 321 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 SLC5A9Q2M3M2 681 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 ARHGAP15Q53QZ3 475 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 MZT2BQ6NZ67 158 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 FAM180BQ6P0A1 224 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 KLHL17Q6TDP4 642 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 KRBA2Q6ZNG9 492 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 KIAA0408Q6ZU52 694 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 USP37Q86T82 979 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 ZNF808Q8N4W9 903 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 IL17DQ8TAD2 202 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 ASB12Q8WXK4 309 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 THAP4Q8WY91 577 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 PPP1R9BQ96SB3 815 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 PRPF18Q99633 342 aaKnown RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 MS4A7Q9GZW8 240 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 VPS45Q9NRW7 570 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 AURKAIP1Q9NWT8 199 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 GGA3Q9NZ52 723 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 IFT80Q9P2H3 777 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-211ENST00000484581 XPR1Q9UBH6 696 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 CA14Q9ULX7 337 aa5.23□□□□□ -1.57
VPS13A-211ENST00000484581 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 PRSS47A8MTI9 375 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 SOAT2O75908 522 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CD4P01730 458 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 POLBP06746 335 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CYP2C9P11712 490 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 XRCC6P12956 609 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CAPN3P20807 821 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CNTFP26441 200 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CST5P28325 142 aaPredicted RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 INHBCP55103 352 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 NPEPPSP55786 919 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CLRN1P58418 232 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 TUBA3CQ13748 450 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 ARHGEF7Q14155 803 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 TRIM71Q2Q1W2 868 aaKnown RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 AMOTQ4VCS5 1084 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 ANKRD45Q5TZF3 282 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 TUBA3EQ6PEY2 450 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CRTC1Q6UUV9 634 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 UBE3BQ7Z3V4 1068 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 FTSJ3Q8IY81 847 aaKnown RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 ESX1Q8N693 406 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 OR14K1Q8NGZ2 314 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 SLC35B2Q8TB61 432 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 HERVK_113Q902F9 699 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 RUBCNQ92622 972 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 RABGGTAQ92696 567 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 RPL10LQ96L21 214 aaKnown RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 GPHA2Q96T91 129 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 CPEB1Q9BZB8 566 aaKnown RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 IKZF4Q9H2S9 585 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 IL23AQ9NPF7 189 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 XPNPEP3Q9NQH7 507 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 SMC4Q9NTJ3 1288 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 NCDNQ9UBB6 729 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 NRBP1Q9UHY1 535 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 SLC45A2Q9UMX9 530 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 SCAF8Q9UPN6 1271 aaKnown RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 AGAP1Q9UPQ3 857 aa5.22□□□□□ -1.57
VPS13A-211ENST00000484581 MTO1Q9Y2Z2 717 aaKnown RBP5.22□□□□□ -1.57
VPS13A-211ENST00000484581 PMS2P1A4D2B8 440 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 HOXC11O43248 304 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 ADH4P08319 380 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 XBP1P17861 261 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 ELF1P32519 619 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 KRT9P35527 623 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 ADD2P35612 726 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 CPT1AP50416 773 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 TLE2Q04725 743 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 NSUN2Q08J23 767 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 KCTD2Q14681 263 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 UTP14CQ5TAP6 766 aaKnown RBP5.21□□□□□ -1.58
VPS13A-211ENST00000484581 VPS53Q5VIR6 699 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
VPS13A-211ENST00000484581 MRNIPQ6NTE8 343 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms