RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SLC13A1Q9BZW2 595 aa11.82□□□□□ -0.52
SMPD4-218ENST00000482171 CCDC68Q9H2F9 335 aa11.82□□□□□ -0.52
SMPD4-218ENST00000482171 NPHS2Q9NP85 383 aa11.82□□□□□ -0.52
SMPD4-218ENST00000482171 NEU2Q9Y3R4 380 aa11.82□□□□□ -0.52
SMPD4-218ENST00000482171 MYH14Q7Z406 1995 aaKnown RBP11.82□□□□□ -0.52
SMPD4-218ENST00000482171 PKD1L3Q7Z443 1732 aa11.82□□□□□ -0.52
SMPD4-218ENST00000482171 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 NVLO15381 856 aaKnown RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 KCNA3P22001 575 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 OR1G1P47890 313 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 IRF2BP2Q7Z5L9 587 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 NT5DC3Q86UY8 548 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 MTMR14Q8NCE2 650 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 URGCPQ8TCY9 931 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 ATP9BO43861 1147 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 CDH16O75309 829 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 SERPINB4P48594 390 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 ZNF280AP59817 542 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 JADE1Q6IE81 842 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 ZPBP2Q6X784 338 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 SLC7A14Q8TBB6 771 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 GLT1D1Q96MS3 346 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 SPON2Q9BUD6 331 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 ZNF214Q9UL59 606 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 MRPS35P82673 323 aaKnown RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 GCNT1Q02742 428 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 CUL3Q13618 768 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 PDCD6IPQ8WUM4 868 aaKnown RBP11.81□□□□□ -0.52
SMPD4-218ENST00000482171 GMLQ99445 158 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 UBN1Q9NPG3 1134 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 FAM53CQ9NYF3 392 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 LAMB4A4D0S4 1761 aa11.81□□□□□ -0.52
SMPD4-218ENST00000482171 IQANK1A0A1B0GTG1 560 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 KRT37O76014 449 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 FECHP22830 423 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 NDST1P52848 882 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ACTRT1Q8TDG2 376 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 C7orf43Q8WVR3 580 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 CCDC124Q96CT7 223 aaKnown RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TINF2Q9BSI4 451 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TRABDQ9H4I3 376 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 HAO1Q9UJM8 370 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 CASTOR2A6NHX0 329 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TADA2AO75478 443 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 NOL4O94818 638 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 FARP2O94887 1054 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 KCNA2P16389 499 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 NCF2P19878 526 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 MARCKSL1P49006 195 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 DEUP1Q05D60 604 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 DYNC1I2Q13409 638 aaKnown RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 BMT2Q1RMZ1 405 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ZCWPW2Q504Y3 356 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TDRD10Q5VZ19 366 aaKnown RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ATP11CQ8NB49 1132 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 NAF1Q96HR8 494 aaKnown RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ZBED2Q9BTP6 218 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 VPS11Q9H270 941 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 VTA1Q9NP79 307 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 NDE1Q9NXR1 346 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 SPECC1L-ADORA2AF8WAN1 911 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 DFFAO00273 331 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 COPEO14579 308 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 NKRFO15226 690 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 PROSCO94903 275 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 ITIH2P19823 946 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 PRKCIP41743 596 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TPI1P60174 286 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 THOC5Q13769 683 aaKnown RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 STILQ15468 1287 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TRADDQ15628 312 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 SV2CQ496J9 727 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 FAM131BQ86XD5 332 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 SPATA2LQ8IUW3 424 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 BCAP29Q9UHQ4 241 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 TLK1Q9UKI8 766 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 C15orf41Q9Y2V0 281 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 MRPL42Q9Y6G3 142 aaKnown RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 H3BRJ5 948 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 CFLARO15519 480 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 GSTA1P08263 222 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 GSTA2P09210 222 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 UBTFL6P0CB48 400 aaPredicted RBP11.8□□□□□ -0.52
SMPD4-218ENST00000482171 PGM1P36871 562 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 FCGRTP55899 365 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 MDH1BQ5I0G3 518 aa11.8□□□□□ -0.52
SMPD4-218ENST00000482171 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms