RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SMARCD1Q96GM5 515 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 SPATA17Q96L03 361 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 C8orf48Q96LL4 319 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 HEXIM2Q96MH2 286 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 HNRNPABQ99729 332 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF518BQ9C0D4 1074 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 CBX8Q9HC52 389 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 UBE2TQ9NPD8 197 aaPredicted RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 EHD2Q9NZN4 543 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 KIAA1257Q9ULG3 409 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 MRPS23Q9Y3D9 190 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 PCDHB4Q9Y5E5 795 aa11.5□□□□□ -0.57
ATG4B-219ENST00000479941 ZFP37Q9Y6Q3 630 aaPredicted RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
ATG4B-219ENST00000479941 C2CD4DB7Z1M9 353 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 F8VP50 259 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 AP1G2O75843 785 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 NOL4O94818 638 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 PAEPP09466 180 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 FAM200BP0CF97 657 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 MYL4P12829 197 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 CCDC130P13994 396 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 RFX1P22670 979 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 GBP2P32456 591 aaPredicted RBP11.49□□□□□ -0.57
ATG4B-219ENST00000479941 GPR15P49685 360 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 KCNMA1Q12791 1236 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 PRSS36Q5K4E3 855 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 ARHGAP17Q68EM7 881 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 LRSAM1Q6UWE0 723 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 DENND5BQ6ZUT9 1274 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 TMC8Q8IU68 726 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 ZDHHC14Q8IZN3 488 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 HS6ST3Q8IZP7 471 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 GPR152Q8TDT2 470 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 TRMT2BQ96GJ1 504 aaKnown RBP11.49□□□□□ -0.57
ATG4B-219ENST00000479941 MYRFLQ96LU7 910 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 KREMEN1Q96MU8 473 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 DMAP1Q9NPF5 467 aaPredicted RBP11.49□□□□□ -0.57
ATG4B-219ENST00000479941 FAM49BQ9NUQ9 324 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
ATG4B-219ENST00000479941 CDH7Q9ULB5 785 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 CNTN6Q9UQ52 1028 aa11.49□□□□□ -0.57
ATG4B-219ENST00000479941 SLC38A8A6NNN8 435 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 LGALS16A8MUM7 142 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 GOLGA6L19H0YKK7 550 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 CLDN5O00501 218 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 VDRP11473 427 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 ATP1A3P13637 1013 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 HMGA1P17096 107 aaKnown RBP11.48□□□□□ -0.57
ATG4B-219ENST00000479941 SP100P23497 879 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-219ENST00000479941 GABRR2P28476 465 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 ADORA2BP29275 332 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 CDC25CP30307 473 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-219ENST00000479941 CCR2P41597 374 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 SLC5A9Q2M3M2 681 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 SGO2Q562F6 1265 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 PPP1R26Q5T8A7 1209 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-219ENST00000479941 KLHDC7AQ5VTJ3 777 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
ATG4B-219ENST00000479941 ITFG1Q8TB96 612 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 FGF13Q92913 245 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 MYADMQ96S97 322 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 GPR88Q9GZN0 384 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 CSNK1G1Q9HCP0 422 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF334Q9HCZ1 680 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-219ENST00000479941 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 PLCB1Q9NQ66 1216 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 KRT82Q9NSB4 513 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 GDE1Q9NZC3 331 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 EPS15L1Q9UBC2 864 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 DAAM1Q9Y4D1 1078 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 DENND4AQ7Z401 1863 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 PTPRDP23468 1912 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 DOCK6Q96HP0 2047 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 TRIOO75962 3097 aa11.48□□□□□ -0.57
ATG4B-219ENST00000479941 A0A1W2PRU2 124 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-219ENST00000479941 LAMP2P13473 410 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 CD19P15391 556 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 NPR3P17342 541 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 ZNF132P52740 706 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 CACNA2D1P54289 1103 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 SLC8A3P57103 927 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 APBA1Q02410 837 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 UBXN1Q04323 297 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 MTMR3Q13615 1198 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 STILQ15468 1287 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 FILIP1LQ4L180 1135 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 CLEC20AQ6ZU45 233 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 GAREM2Q75VX8 874 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
ATG4B-219ENST00000479941 NUP93Q8N1F7 819 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms