RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 LCMT1Q9UIC8 334 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF112Q9UJU3 913 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ZHX1Q9UKY1 873 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 FAN1Q9Y2M0 1017 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 NOC2LQ9Y3T9 749 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ATAD5Q96QE3 1844 aa6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 RBBP6Q7Z6E9 1792 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-204ENST00000474020 ASTN2O75129 1339 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF233A6NK53 670 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SPOPO43791 374 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 LRRN2O75325 713 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 TFRCP02786 760 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SUPT20HL2P0C7V6 817 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 MYBL1P10243 752 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 GZMAP12544 262 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 ABCB4P21439 1286 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 MAN1A1P33908 653 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 ACTN2P35609 894 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 CETN2P41208 172 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 NPTX2P47972 431 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 AP3M2P53677 418 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 HADHBP55084 474 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 GPC5P78333 572 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 TAGLNQ01995 201 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 PRKCEQ02156 737 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 LMNB2Q03252 620 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 DHX34Q14147 1143 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 CBWD6Q4V339 395 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 EPC2Q52LR7 807 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 CBWD3Q5JTY5 395 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 CBWD5Q5RIA9 395 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 NOL9Q5SY16 702 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 LIN9Q5TKA1 542 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 GJB7Q6PEY0 223 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 LRIG3Q6UXM1 1119 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SLFN11Q7Z7L1 901 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 RPUSD2Q8IZ73 545 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 ANKRD35Q8N283 1001 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 MREGQ8N565 214 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 LRRC57Q8N9N7 239 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 FBXL13Q8NEE6 735 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC30A5Q8TAD4 765 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SLC35G2Q8TBE7 412 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 CCDC127Q96BQ5 260 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 MS4A14Q96JA4 679 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 HSPA12BQ96MM6 686 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 RPS6KC1Q96S38 1066 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 FIZ1Q96SL8 496 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 JPH2Q9BR39 696 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM129AQ9BZQ8 928 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 POLR3FQ9H1D9 316 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 WNT8AQ9H1J5 351 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 ISCUQ9H1K1 167 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 AZI2Q9H6S1 392 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 POLD4Q9HCU8 107 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF302Q9NR11 478 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 CYP26B1Q9NR63 512 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 LMCD1Q9NZU5 365 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 WRAP73Q9P2S5 460 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 UVRAGQ9P2Y5 699 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 VTI1BQ9UEU0 232 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 MTRF1LQ9UGC7 380 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 TTC7AQ9ULT0 858 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 NENFQ9UMX5 172 aa6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-204ENST00000474020 HMGB1P1B2RPK0 211 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 FZD9O00144 591 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 FOXN3O00409 490 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 EXTL3O43909 919 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 BUB1BO60566 1050 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ZBTB7AO95365 584 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 FGGP02679 453 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 FTLP02792 175 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 MYZAPP0CAP1 466 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 DLATP10515 647 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 KRT5P13647 590 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 TBXAS1P24557 533 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CNGA1P29973 690 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CHRNA3P32297 505 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 RDXP35241 583 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 PIK3CAP42336 1068 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 GPC3P51654 580 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 EFNA5P52803 228 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 RNASE9P60153 205 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 ACTR2P61160 394 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 IRX3P78415 501 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 MAP2K1Q02750 393 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CYP24A1Q07973 514 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 FZD5Q13467 585 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 BIRC3Q13489 604 aa6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-204ENST00000474020 NEDD9Q14511 834 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms