RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 IGF2-ASQ6U949 168 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 TRMT11Q7Z4G4 463 aaKnown RBP7.23□□□□□ -1.25
HDAC3-206ENST00000471968 ITIH5Q86UX2 942 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 HEATR4Q86WZ0 1026 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 MCEMP1Q8IX19 187 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 RNF149Q8NC42 400 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 IPO4Q8TEX9 1081 aaKnown RBP7.23□□□□□ -1.25
HDAC3-206ENST00000471968 HTR3CQ8WXA8 447 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 PNKPQ96T60 521 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 UBAC1Q9BSL1 405 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 GOLGA2P5Q9HBQ8 144 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 PCDHGA4Q9Y5G9 962 aa7.23□□□□□ -1.25
HDAC3-206ENST00000471968 ANK1P16157 1881 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 A0A1W2PNU3 283 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-206ENST00000471968 FAM86B1E9PN63 330 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 INO80B-WBP1J3KQ70 363 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 SYN3O14994 580 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 CYP26A1O43174 497 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 DFNA5O60443 496 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 FAM86B2P0C5J1 330 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-206ENST00000471968 GRIA4P48058 902 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 POLE2P56282 527 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 LAMTOR4Q0VGL1 99 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TESK1Q15569 626 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TGIF1Q15583 401 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ZNF77Q15935 545 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TAF12Q16514 161 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 GLRA4Q5JXX5 417 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 SLC27A1Q6PCB7 646 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 SV2AQ7L0J3 742 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TIPARPQ7Z3E1 657 aaKnown RBP7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ADAT2Q7Z6V5 191 aaKnown RBP7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ITPRIPQ8IWB1 547 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TTC9BQ8N6N2 239 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 BEST2Q8NFU1 509 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 SPATA3Q8NHX4 192 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 SAP25Q8TEE9 199 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TMEM143Q96AN5 459 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 RRP36Q96EU6 259 aaKnown RBP7.22□□□□□ -1.25
HDAC3-206ENST00000471968 MRGPRX1Q96LB2 322 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TMEM245Q9H330 911 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TM9SF3Q9HD45 589 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ARHGEF4Q9NR80 690 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 TBC1D22BQ9NU19 505 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ZSWIM5Q9P217 1185 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 SEC63Q9UGP8 760 aaKnown RBP7.22□□□□□ -1.25
HDAC3-206ENST00000471968 ZMYM5Q9UJ78 669 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 COL6A5A8TX70 2615 aa7.22□□□□□ -1.25
HDAC3-206ENST00000471968 CSPG4Q6UVK1 2322 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 PMS2P1A4D2B8 440 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 CDRT15L2A8MXV6 281 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 B4GALT5O43286 388 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 SMARCA5O60264 1052 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 ACP1P24666 158 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 NTSR1P30989 418 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 GRIA2P42262 883 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 TNFRSF4P43489 277 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 VASPP50552 380 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 ZNF268Q14587 947 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 CDCP2Q5VXM1 449 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 BORAQ6PGQ7 559 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 RSRC2Q7L4I2 434 aaKnown RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 TAOK1Q7L7X3 1001 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 NIPA1Q7RTP0 329 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 MIB1Q86YT6 1006 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 ZSCAN1Q8NBB4 408 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 GALNT11Q8NCW6 608 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 PSPC1Q8WXF1 523 aaKnown RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 ELF4Q99607 663 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 JPH2Q9BR39 696 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 MRS2Q9HD23 443 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 BMP2KQ9NSY1 1161 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-206ENST00000471968 RAD54BQ9Y620 910 aa7.21□□□□□ -1.26
HDAC3-206ENST00000471968 ZNF469Q96JG9 3925 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-206ENST00000471968 TBC1D3BA6NDS4 549 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 DDX11L8A8MPP1 907 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 KCNJ18B7U540 433 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 CHMP2AO43633 222 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 DDX6P26196 483 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC3-206ENST00000471968 C21orf59P57076 290 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 RPL10AP62906 217 aaKnown RBP7.2□□□□□ -1.26
HDAC3-206ENST00000471968 FAM160A1Q05DH4 1040 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 RESTQ13127 1097 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 VEPH1Q14D04 833 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 PCBP1Q15365 356 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC3-206ENST00000471968 SHBQ15464 509 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 AMHR2Q16671 573 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 XKR3Q5GH77 459 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 PLA2G4FQ68DD2 849 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 CENPPQ6IPU0 288 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 TMEM150AQ86TG1 271 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 ARL14Q8N4G2 192 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 ATAD1Q8NBU5 361 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 C9orf43Q8TAL5 461 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-206ENST00000471968 HPS3Q969F9 1004 aa7.2□□□□□ -1.26
HDAC3-206ENST00000471968 PRR11Q96HE9 360 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-206ENST00000471968 LURAP1Q96LR2 239 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms