RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 APOPT1Q96IL0 206 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 GCNAQ96QF7 691 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 SLC13A1Q9BZW2 595 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 MIS12Q9H081 205 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
VPS52-212ENST00000445902 I3L4J1 428 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 TGDSO95455 350 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 ATP6V1B1P15313 513 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 SERPINB6P35237 376 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 VCPP55072 806 aaKnown RBP14.59□□□□□ -0.07
VPS52-212ENST00000445902 KLHL38Q2WGJ6 581 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 GRAMD1BQ3KR37 738 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 KBTBD12Q3ZCT8 623 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 ZCCHC23Q6ZST2 131 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 RBM12BQ8IXT5 1001 aaKnown RBP14.59□□□□□ -0.07
VPS52-212ENST00000445902 CPT1BQ92523 772 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 FAM163AQ96GL9 167 aaPredicted RBP14.59□□□□□ -0.07
VPS52-212ENST00000445902 PCDHGB4Q9UN71 923 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 PCDHGB5Q9Y5G0 923 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 ADAMTSL1Q8N6G6 1762 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 A0A088AWK7 358 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 MAGEB3O15480 346 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 FAM163BP0C2L3 166 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 DHRS4L1P0CG22 281 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 IRX4P78413 519 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 BTKQ06187 659 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 PEX6Q13608 980 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 FAM81BQ96LP2 452 aa14.59□□□□□ -0.07
VPS52-212ENST00000445902 SPDYE16A6NNV3 312 aaPredicted RBP14.58□□□□□ -0.07
VPS52-212ENST00000445902 F8VP50 259 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 GNPATO15228 680 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 TMEM63AO94886 807 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 HLA-DOAP06340 250 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 MAGEA10P43363 369 aaPredicted RBP14.58□□□□□ -0.07
VPS52-212ENST00000445902 GPC3P51654 580 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 PSMC5P62195 406 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 PTP4A2Q12974 167 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 MYBPC2Q14324 1141 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 HIC1Q14526 733 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 CHI3L2Q15782 390 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 LIN9Q5TKA1 542 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 DPY19L2Q6NUT2 758 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 PAOXQ6QHF9 649 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 SPOCD1Q6ZMY3 1216 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 DCAF4Q8WV16 495 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 SRPK1Q96SB4 655 aaKnown RBP14.58□□□□□ -0.07
VPS52-212ENST00000445902 DHRS4Q9BTZ2 278 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 KLHL4Q9C0H6 718 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 TMEM8AQ9HCN3 771 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 GGA1Q9UJY5 639 aa14.58□□□□□ -0.07
VPS52-212ENST00000445902 C15orf38-AP3S2A0A0A6YYH1 394 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 COPEO14579 308 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 NDUFB10O96000 172 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 INHBAP08476 426 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 IL1R1P14778 569 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 GALK1P51570 392 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 YWHAGP61981 247 aaKnown RBP eCLIP14.58□□□□□ -0.08
VPS52-212ENST00000445902 BASP1P80723 227 aaKnown RBP14.58□□□□□ -0.08
VPS52-212ENST00000445902 OASLQ15646 514 aaKnown RBP14.58□□□□□ -0.08
VPS52-212ENST00000445902 EFHC1Q5JVL4 640 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 TCHHL1Q5QJ38 904 aaPredicted RBP14.58□□□□□ -0.08
VPS52-212ENST00000445902 TMCO4Q5TGY1 634 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 ARPINQ7Z6K5 226 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 CHSY1Q86X52 802 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 CTAGE3PQ8IX95 158 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 ALKBH8Q96BT7 664 aaKnown RBP14.58□□□□□ -0.08
VPS52-212ENST00000445902 CCDC28BQ9BUN5 200 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 C20orf27Q9GZN8 174 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 TMCC1O94876 653 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 DESP17661 470 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 HPCAP84074 193 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 HNRNPDQ14103 355 aaKnown RBP14.58□□□□□ -0.08
VPS52-212ENST00000445902 SMTNL2Q2TAL5 461 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 DNAL1Q4LDG9 190 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 SIAH1Q8IUQ4 282 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 CEP70Q8NHQ1 597 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 GRIP2Q9C0E4 1043 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 NARFQ9UHQ1 456 aa14.58□□□□□ -0.08
VPS52-212ENST00000445902 XPO7Q9UIA9 1087 aaKnown RBP14.58□□□□□ -0.08
VPS52-212ENST00000445902 A0A0J9YVX5 310 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 CAPN8A6NHC0 703 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 VILLO15195 856 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 STIP1P31948 543 aaKnown RBP14.57□□□□□ -0.08
VPS52-212ENST00000445902 ELK3P41970 407 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 CHN2P52757 468 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 ZNF200P98182 395 aaPredicted RBP14.57□□□□□ -0.08
VPS52-212ENST00000445902 MEX3CQ5U5Q3 659 aaKnown RBP14.57□□□□□ -0.08
VPS52-212ENST00000445902 PTF1AQ7RTS3 328 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 PCDH9Q9HC56 1237 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 C1orf112Q9NSG2 853 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 KCNK4Q9NYG8 393 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 POLLQ9UGP5 575 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 PACSIN3Q9UKS6 424 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
VPS52-212ENST00000445902 PCDHAC2Q9Y5I4 1007 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 IQANK1A0A1B0GTG1 560 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 TRIM49D1C9J1S8 452 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 FKBP6O75344 327 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 AVILO75366 819 aa14.57□□□□□ -0.08
VPS52-212ENST00000445902 TOP3BO95985 862 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms