RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 FAM71AQ8IYT1 594 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 MSCO60682 206 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 TMCC1O94876 653 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 SMTNL2Q2TAL5 461 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 DUSP10Q9Y6W6 482 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 SPRP35270 261 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 TMEM86AQ8N2M4 240 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 BMP6P22004 513 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 POP1Q99575 1024 aaKnown RBP12.03□□□□□ -0.48
PTCH1-208ENST00000430669 FBXO44Q9H4M3 255 aa12.03□□□□□ -0.48
PTCH1-208ENST00000430669 RBP3P10745 1247 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 ALDH7A1P49419 539 aaKnown RBP12.02□□□□□ -0.48
PTCH1-208ENST00000430669 CARSP49589 748 aaKnown RBP12.02□□□□□ -0.48
PTCH1-208ENST00000430669 ACVR2BQ13705 512 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 HSP90AA5PQ58FG0 334 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 TLK2Q86UE8 772 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-208ENST00000430669 DDNO94850 711 aaPredicted RBP12.02□□□□□ -0.48
PTCH1-208ENST00000430669 SNRPAP09012 282 aaKnown RBP12.02□□□□□ -0.48
PTCH1-208ENST00000430669 SPATA31C1P0DKV0 1188 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 MFSD10Q14728 455 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 CASKIN2Q8WXE0 1202 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 OLA1Q9NTK5 396 aaKnown RBP12.02□□□□□ -0.48
PTCH1-208ENST00000430669 RAB21Q9UL25 225 aa12.02□□□□□ -0.48
PTCH1-208ENST00000430669 TEDDM1Q5T9Z0 273 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 MICAL1Q8TDZ2 1067 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 SLC13A1Q9BZW2 595 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 VPS11Q9H270 941 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 SNED1Q8TER0 1413 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 MAP2K2P36507 400 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 OCRLQ01968 901 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 ZIM3Q96PE6 472 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 AP1G2O75843 785 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 CTSHP09668 335 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 ELAVL2Q12926 359 aaKnown RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 PTK6Q13882 451 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 KIF19Q2TAC6 998 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 MSL3Q8N5Y2 521 aaKnown RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 PCDH9Q9HC56 1237 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 CABYRO75952 493 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 SLC4A1P02730 911 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 CHN1P15882 459 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 MYL6P60660 151 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 PTK7Q13308 1070 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 FOCADQ5VW36 1801 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 UBA3Q8TBC4 463 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 MTMR8Q96EF0 704 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 PPARGC1AQ9UBK2 798 aaKnown RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 DERAQ9Y315 318 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 KRT16P08779 473 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 PLD1Q13393 1074 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 CCDC60Q8IWA6 550 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 SMARCD1Q96GM5 515 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 SHOC2Q9UQ13 582 aa12.02□□□□□ -0.49
PTCH1-208ENST00000430669 USP15Q9Y4E8 981 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-208ENST00000430669 MAFO75444 373 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 OR1G1P47890 313 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 SERPINB4P48594 390 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 ARFIP2P53365 341 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 HDAC4P56524 1084 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 KATNAL2Q8IYT4 538 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 PI4K2BG5E9Z4 385 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 PRRG1O14668 218 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 AP2B1P63010 937 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 SLC15A5A6NIM6 579 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 ZNF280AP59817 542 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 ERMARDQ5T6L9 678 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 SPATA21Q7Z572 469 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 TMEM161BQ8NDZ6 487 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 CCT8L2Q96SF2 557 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 CELF4Q9BZC1 486 aaKnown RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 TNRC6CQ9HCJ0 1690 aaKnown RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 A0A087WZ62 844 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 SESN3P58005 492 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 SLC29A2Q14542 456 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 NT5DC3Q86UY8 548 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 PTPRN2Q92932 1015 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 FDXACB1Q9BRP7 624 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 LACRTQ9GZZ8 138 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 TNFSF13BQ9Y275 285 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 MTO1Q9Y2Z2 717 aaKnown RBP12.01□□□□□ -0.49
PTCH1-208ENST00000430669 TM9SF1O15321 606 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 FAM107AO95990 144 aa12.01□□□□□ -0.49
PTCH1-208ENST00000430669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms