RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 SPPL2BQ8TCT7 592 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 ZNF606Q8WXB4 792 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 SMARCD1Q96GM5 515 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 PCED1BQ96HM7 432 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 PANX2Q96RD6 677 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 AGPAT1Q99943 283 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 RTP3Q9BQQ7 232 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 B3GNT5Q9BYG0 378 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 TTYH3Q9C0H2 523 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 NSUN3Q9H649 340 aaKnown RBP9.46□□□□□ -0.9
BRCC3-206ENST00000399042 RXFP1Q9HBX9 757 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 ACP6Q9NPH0 428 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 CRTAC1Q9NQ79 661 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 AIPL1Q9NZN9 384 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 AFF4Q9UHB7 1163 aaKnown RBP9.46□□□□□ -0.9
BRCC3-206ENST00000399042 TSPAN16Q9UKR8 245 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 TRIP11Q15643 1979 aa9.46□□□□□ -0.9
BRCC3-206ENST00000399042 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 ANK1P16157 1881 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 WDR27A2RRH5 827 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TMCO5BA8MYB1 307 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 SOX1O00570 391 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 FSCN2O14926 492 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TRIM66O15016 1216 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 ADAM12O43184 909 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TGM5O43548 720 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 MICAL2O94851 1124 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 LRG1P02750 347 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 CYP2F1P24903 491 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 CYLC1P35663 651 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 EIF4A3P38919 411 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 NSFP46459 744 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 ZNF132P52740 706 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 BCAT1P54687 386 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 EPHB3P54753 998 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 MAP3K7CLP57077 242 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 RPL10AP62906 217 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 CDR2Q01850 454 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 IFRD2Q12894 506 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 PLD1Q13393 1074 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 RAB33AQ14088 237 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 VEPH1Q14D04 833 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 SPA17Q15506 151 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 HABP4Q5JVS0 413 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 FAM171BQ6P995 826 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TRIM72Q6ZMU5 477 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 IRF2BP2Q7Z5L9 587 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 NOP9Q86U38 636 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 FAM35AQ86V20 835 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 LRRTM3Q86VH5 581 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TMTC1Q8IUR5 882 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 UBR7Q8N806 425 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 ANKRD52Q8NB46 1076 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TMEM35BQ8NCS4 154 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 KREMEN2Q8NCW0 462 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 SLC20A1Q8WUM9 679 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TFAP2BQ92481 460 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 FUBP3Q96I24 572 aaKnown RBP eCLIP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 DNAJC7Q99615 494 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 HNRNPABQ99729 332 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 BAG1Q99933 345 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 ZNF518BQ9C0D4 1074 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 GPR88Q9GZN0 384 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 LRRC4Q9HBW1 653 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 DMAP1Q9NPF5 467 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 LUC7LQ9NQ29 371 aaKnown RBP9.45□□□□□ -0.9
BRCC3-206ENST00000399042 TMLHEQ9NVH6 421 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 CNTN6Q9UQ52 1028 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 IRAK3Q9Y616 596 aa9.45□□□□□ -0.9
BRCC3-206ENST00000399042 MTMR11A4FU01 709 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 O00370 1275 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 LILRB3O75022 631 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 CLASP2O75122 1294 aaKnown RBP9.44□□□□□ -0.9
BRCC3-206ENST00000399042 EFEMP2O95967 443 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 MMEP08473 750 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 SETSIPP0DME0 302 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 ATF2P15336 505 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 NPR3P17342 541 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 BST2Q10589 180 aaKnown RBP9.44□□□□□ -0.9
BRCC3-206ENST00000399042 CCDC142Q17RM4 750 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 PPM1LQ5SGD2 360 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 NAA35Q5VZE5 725 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 ARHGAP17Q68EM7 881 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 DENND1BQ6P3S1 775 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 LCLAT1Q6UWP7 414 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 VSTM1Q6UX27 236 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 ERICH1Q86X53 443 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 FUKQ8N0W3 1084 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 SIX6OS1Q8N1H7 587 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 TC2NQ8N9U0 490 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 CCDC112Q8NEF3 446 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 SLC7A14Q8TBB6 771 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 GOLGA1Q92805 767 aa9.44□□□□□ -0.9
BRCC3-206ENST00000399042 SECISBP2LQ93073 1101 aaKnown RBP9.44□□□□□ -0.9
BRCC3-206ENST00000399042 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-206ENST00000399042 CDCA3Q99618 268 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-206ENST00000399042 DUSP16Q9BY84 665 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms