RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 NINJ2Q9NZG7 142 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 TSPAN16Q9UKR8 245 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 HAS3O00219 553 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 ENDOD1O94919 500 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 ZNF143P52747 638 aaPredicted RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 MAP2K5Q13163 448 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 SMTNL2Q2TAL5 461 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 B4GALNT4Q76KP1 1039 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 CATSPER4Q7RTX7 472 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 UBA3Q8TBC4 463 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 PWWP2AQ96N64 755 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 EIF2AQ9BY44 585 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 MIS12Q9H081 205 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 ZWILCHQ9H900 591 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 PCDH9Q9HC56 1237 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 PPANQ9NQ55 473 aaKnown RBP9.51□□□□□ -0.89
TDP1-202ENST00000393452 SNTG2Q9NY99 539 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 CNTN3Q9P232 1028 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 GGA2Q9UJY4 613 aa9.51□□□□□ -0.89
TDP1-202ENST00000393452 SMIM23A6NLE4 172 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 C2CD4BA6NLJ0 364 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 RNF8O76064 485 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 TRUB2O95900 331 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 MIPP30301 263 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 AXLP30530 894 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 SLCO1A2P46721 670 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 ARSEP51690 589 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CORO7P57737 925 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 TMEM62Q0P6H9 643 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 HIC1Q14526 733 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 MORF4L2Q15014 288 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 LONRF1Q17RB8 773 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 KCNT1Q5JUK3 1230 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 PRAMEF19Q5SWL8 479 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 FAM102AQ5T9C2 384 aaPredicted RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 TRNP1Q6NT89 227 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CYP4V2Q6ZWL3 525 aaPredicted RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 SPATS2Q86XZ4 545 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 MDM1Q8TC05 714 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 ACTL9Q8TC94 416 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 XPO6Q96QU8 1125 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 RBM15Q96T37 977 aaKnown RBP eCLIP9.5□□□□□ -0.89
TDP1-202ENST00000393452 OSMRQ99650 979 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CNPY3Q9BT09 278 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 DNAJC17Q9NVM6 304 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 ASNSD1Q9NWL6 643 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 FLRT1Q9NZU1 646 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 TPX2Q9ULW0 747 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 USP18Q9UMW8 372 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 C5orf60A6NFR6 353 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 E5RJQ4 531 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 NDC80O14777 642 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 PPEF2O14830 753 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CST8O60676 142 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 ABHD2P08910 425 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 ZSCAN5DPP0CG00 497 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CYP2C9P11712 490 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CHN1P15882 459 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 YARSP54577 528 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 MFSD10Q14728 455 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 RNASEH2BQ5TBB1 312 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 OLFML2BQ68BL8 750 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 TLK2Q86UE8 772 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 C12orf29Q8N999 325 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 ATXN2LQ8WWM7 1075 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 USP6NLQ92738 828 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 MRPL45Q9BRJ2 306 aaKnown RBP9.5□□□□□ -0.89
TDP1-202ENST00000393452 TMEM121Q9BTD3 319 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 FAM107BQ9H098 131 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 CPA4Q9UI42 421 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 SHOC2Q9UQ13 582 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 GINS2Q9Y248 185 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 NME7Q9Y5B8 376 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 FAM169AQ9Y6X4 670 aa9.5□□□□□ -0.89
TDP1-202ENST00000393452 IGHA2P01877 340 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 CD48P09326 243 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 ETS1P14921 441 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 GPD1P21695 349 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 OTUD4Q01804 1114 aaKnown RBP9.49□□□□□ -0.89
TDP1-202ENST00000393452 GPS1Q13098 491 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 SNX17Q15036 470 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 GOLGA7BQ2TAP0 167 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 PPP1R26Q5T8A7 1209 aaPredicted RBP9.49□□□□□ -0.89
TDP1-202ENST00000393452 CST9Q5W186 159 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 PMF1Q6P1K2 205 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 FAM183BPQ6ZVS7 135 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 TAOK1Q7L7X3 1001 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 TMEM110Q86TL2 294 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 EXOC3L1Q86VI1 746 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 UNC93AQ86WB7 457 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 TTC30AQ86WT1 665 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 BEST2Q8NFU1 509 aa9.49□□□□□ -0.89
TDP1-202ENST00000393452 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms