RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
USF1-203ENST00000368021 WSCD1Q658N2 575 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 DCLRE1AQ6PJP8 1040 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 C12orf29Q8N999 325 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CARD6Q9BX69 1037 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 MIS12Q9H081 205 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 GOLPH3Q9H4A6 298 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 RNF14Q9UBS8 474 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 YBX2Q9Y2T7 364 aaKnown RBP12.74□□□□□ -0.37
USF1-203ENST00000368021 ALG6Q9Y672 507 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 UNC80Q8N2C7 3258 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TCRBV5S1A1TA0A578 114 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TMEM189-UBE2V1I3L0A0 370 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 M0QZQ0 153 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 NCK2O43639 380 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 GJB5O95377 273 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CPP00450 1065 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CYP11A1P05108 521 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CA3P07451 260 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 LMO2P25791 158 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 GABRB2P47870 512 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TUBB4BP68371 445 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TAP1Q03518 808 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CKAP4Q07065 602 aaKnown RBP12.74□□□□□ -0.37
USF1-203ENST00000368021 PTPN20Q4JDL3 420 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TIGD5Q53EQ6 642 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 C3orf20Q8ND61 904 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 PHOSPHO2Q8TCD6 241 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TOP1MTQ969P6 601 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 NKX2-4Q9H2Z4 354 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 TBC1D13Q9NVG8 400 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 WDR35Q9P2L0 1181 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 HESX1Q9UBX0 185 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 CHORDC1Q9UHD1 332 aaPredicted RBP12.74□□□□□ -0.37
USF1-203ENST00000368021 CYTH4Q9UIA0 394 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 MSRAQ9UJ68 235 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 ANAPC7Q9UJX3 599 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 DSEQ9UL01 958 aa12.74□□□□□ -0.37
USF1-203ENST00000368021 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 TRANK1O15050 2925 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 LCHNA4D1U4 455 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 EFCAB8A8MWE9 144 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 MIF4GDA9UHW6 222 aaKnown RBP12.73□□□□□ -0.37
USF1-203ENST00000368021 MYO1FO00160 1098 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 PPP1R12AO14974 1030 aaPredicted RBP12.73□□□□□ -0.37
USF1-203ENST00000368021 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 ODC1P11926 461 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 IGFBP6P24592 240 aaPredicted RBP12.73□□□□□ -0.37
USF1-203ENST00000368021 PDCLQ13371 301 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 ZSCAN26Q16670 478 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 C2CD6Q53TS8 623 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 CD300LGQ6UXG3 332 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 LEKR1Q6ZMV7 388 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 ZNF572Q7Z3I7 529 aaPredicted RBP12.73□□□□□ -0.37
USF1-203ENST00000368021 OSTM1Q86WC4 334 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 COLGALT2Q8IYK4 626 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 B3GALNT2Q8NCR0 500 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 STK32AQ8WU08 396 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 TIFAQ96CG3 184 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 RPGRIP1Q96KN7 1286 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 CPXM1Q96SM3 734 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 CERS4Q9HA82 394 aa12.73□□□□□ -0.37
USF1-203ENST00000368021 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
USF1-203ENST00000368021 TADA3O75528 432 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 PDGFRBP09619 1106 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 SLC1A1P43005 524 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 BCAT1P54687 386 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 ZNF268Q14587 947 aaPredicted RBP12.72□□□□□ -0.37
USF1-203ENST00000368021 MESDQ14696 234 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 GOLGA7BQ2TAP0 167 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 TTC30AQ86WT1 665 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 ANKRD52Q8NB46 1076 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 FEZF2Q8TBJ5 459 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 PBKQ96KB5 322 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 YME1L1Q96TA2 773 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 FAM49BQ9NUQ9 324 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 KCNK3O14649 394 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 ZNF185O15231 689 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 DDHD2O94830 711 aa12.72□□□□□ -0.37
USF1-203ENST00000368021 ARHGEF15O94989 841 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms