RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PCDHB8Q9UN66 801 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 NRP1O14786 923 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 GJB6O95452 261 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 KRT3P12035 628 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 YWHAHQ04917 246 aaPredicted RBP18.3■□□□□ 0.52
CLDN4-201ENST00000340958 PDE4CQ08493 712 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 GLIPR1L2Q4G1C9 344 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 TMEM240Q5SV17 173 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 OR6B2Q6IFH4 312 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 CD300LGQ6UXG3 332 aa18.3■□□□□ 0.52
CLDN4-201ENST00000340958 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.3■□□□□ 0.52
CLDN4-201ENST00000340958 CTAGE15A4D2H0 777 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 TMEM189-UBE2V1I3L0A0 370 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 CYP11A1P05108 521 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 PFKMP08237 780 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 CTAGE8P0CG41 777 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 TYMPP19971 482 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 TSPY1Q01534 308 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 ZNF268Q14587 947 aaPredicted RBP18.29■□□□□ 0.52
CLDN4-201ENST00000340958 SPOUT1Q5T280 376 aaKnown RBP18.29■□□□□ 0.52
CLDN4-201ENST00000340958 PMF1Q6P1K2 205 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 FAM117BQ6P1L5 589 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 ZNF365Q70YC5 407 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 CTAGE6Q86UF2 777 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 CEP57Q86XR8 500 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 CTAGE4Q8IX94 777 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 COG1Q8WTW3 980 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 HNRNPABQ99729 332 aaKnown RBP18.29■□□□□ 0.52
CLDN4-201ENST00000340958 ACBD6Q9BR61 282 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 TJP2Q9UDY2 1190 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 IP6K2Q9UHH9 426 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 LCMT1Q9UIC8 334 aa18.29■□□□□ 0.52
CLDN4-201ENST00000340958 MIF4GDA9UHW6 222 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 E5RJQ4 531 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 CLDN5O00501 218 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 DYNC1I1O14576 645 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 EFCAB14O75071 495 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 SLC1A1P43005 524 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 BCAR1P56945 870 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 PSRC1Q6PGN9 363 aaPredicted RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 XYLT1Q86Y38 959 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 HES6Q96HZ4 224 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 PBKQ96KB5 322 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 TRIM7Q9C029 511 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 ABCB6Q9NP58 842 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 CRTAC1Q9NQ79 661 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 ADAM28Q9UKQ2 775 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 MYBPHLA2RUH7 354 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 FAM200BP0CF97 657 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 TKTP29401 623 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 SLC11A1P49279 550 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 ALDH7A1P49419 539 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 RNASE9P60153 205 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 RPL7AP62424 266 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 PKDCCQ504Y2 493 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 KIAA0319Q5VV43 1072 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 SLC35F5Q8WV83 523 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 RNPC3Q96LT9 517 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 TMEM175Q9BSA9 504 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 DUSP16Q9BY84 665 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 METTL5Q9NRN9 209 aaKnown RBP18.28■□□□□ 0.52
CLDN4-201ENST00000340958 KRT82Q9NSB4 513 aa18.28■□□□□ 0.52
CLDN4-201ENST00000340958 TULP2O00295 520 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 CEP104O60308 925 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 PROSCO94903 275 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 LCP1P13796 627 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 GABRB2P47870 512 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 INTS6LQ5JSJ4 861 aaKnown RBP18.27■□□□□ 0.52
CLDN4-201ENST00000340958 FAM171A1Q5VUB5 890 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 OTOP2Q7RTS6 562 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 CRIPAKQ8N1N5 446 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 STK32AQ8WU08 396 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 PCED1BQ96HM7 432 aa18.27■□□□□ 0.52
CLDN4-201ENST00000340958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.27■□□□□ 0.52
CLDN4-201ENST00000340958 SF3B1O75533 1304 aaKnown RBP eCLIP18.27■□□□□ 0.51
CLDN4-201ENST00000340958 TTC3P53804 2025 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 TMEM191CA6NGB0 347 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 SIGLEC16A6NMB1 481 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 ZBBXA8MT70 800 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 NT5C1B-RDH14C9J2C7 533 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 SOX1O00570 391 aaPredicted RBP18.26■□□□□ 0.51
CLDN4-201ENST00000340958 AP1G2O75843 785 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 NPR3P17342 541 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 ACADSBP45954 432 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 PLCB3Q01970 1234 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 MAPRE1Q15691 268 aaKnown RBP18.26■□□□□ 0.51
CLDN4-201ENST00000340958 CCDC142Q17RM4 750 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 FAM183BPQ6ZVS7 135 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 SLC4A5Q9BY07 1137 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 HCSTQ9UBK5 93 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 RNF14Q9UBS8 474 aa18.26■□□□□ 0.51
CLDN4-201ENST00000340958 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLDN4-201ENST00000340958 V9GYY5 206 aaPredicted RBP18.26■□□□□ 0.51
CLDN4-201ENST00000340958 CCDC66A2RUB6 948 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms