RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 ASIC3Q9UHC3 531 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 KIAA1257Q9ULG3 409 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 CITO14578 2027 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 RECQL4O94761 1208 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 FLT3LGP49771 235 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 RPL7AP62424 266 aaKnown RBP19.23■□□□□ 0.67
SHISA3-201ENST00000319234 CNGA2Q16280 664 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 PPP1R15BQ5SWA1 713 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 BBOF1Q8ND07 529 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 ATL2Q8NHH9 583 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 HEXIM2Q96MH2 286 aaKnown RBP19.23■□□□□ 0.67
SHISA3-201ENST00000319234 DCLK3Q9C098 648 aa19.23■□□□□ 0.67
SHISA3-201ENST00000319234 NSRP1Q9H0G5 558 aaKnown RBP19.23■□□□□ 0.67
SHISA3-201ENST00000319234 SMIM23A6NLE4 172 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 TP73O15350 636 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 NDST1P52848 882 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 TAS2R40P59535 323 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 PTPN20Q4JDL3 420 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 UBXN11Q5T124 520 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 SWT1Q5T5J6 900 aaKnown RBP19.22■□□□□ 0.67
SHISA3-201ENST00000319234 DCUN1D2Q6PH85 259 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 PIGWQ7Z7B1 504 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 LRRC52Q8N7C0 313 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 SMC1BQ8NDV3 1235 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 CCDC114Q96M63 670 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 TSPAN18Q96SJ8 248 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 SPC25Q9HBM1 224 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 AAASQ9NRG9 546 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 CYTH4Q9UIA0 394 aa19.22■□□□□ 0.67
SHISA3-201ENST00000319234 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHISA3-201ENST00000319234 RALGAPA2Q2PPJ7 1873 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 TCEA3O75764 348 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 RASSF9O75901 435 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 MICAL2O94851 1124 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 HMGCRP04035 888 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 IVDP26440 423 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
SHISA3-201ENST00000319234 CCDC25Q86WR0 208 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 KATNAL2Q8IYT4 538 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 CCT6BQ92526 530 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 MCEEQ96PE7 176 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 TRAIPQ9BWF2 469 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 APOL6Q9BWW8 343 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 TUBGCP4Q9UGJ1 667 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 UBQLN1Q9UMX0 589 aaKnown RBP19.21■□□□□ 0.67
SHISA3-201ENST00000319234 USTQ9Y2C2 406 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 ATF2P15336 505 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 AKAP5P24588 427 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 NKX3-2P78367 333 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 XKR4Q5GH76 650 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 CYP4A22Q5TCH4 519 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 DAB2IPQ5VWQ8 1189 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 CYP4F22Q6NT55 531 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 CEP128Q6ZU80 1094 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 C18orf25Q96B23 403 aaPredicted RBP19.21■□□□□ 0.67
SHISA3-201ENST00000319234 NT5C1AQ9BXI3 368 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 CHST7Q9NS84 486 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 SAMD15Q9P1V8 674 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 WDR35Q9P2L0 1181 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
SHISA3-201ENST00000319234 O00370 1275 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 SEPT4O43236 478 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 TTC4O95801 387 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 GSCP56915 257 aaPredicted RBP19.2■□□□□ 0.66
SHISA3-201ENST00000319234 PPARDQ03181 441 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 KLF1Q13351 362 aaPredicted RBP19.2■□□□□ 0.66
SHISA3-201ENST00000319234 CCNG2Q16589 344 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 NBPF20Q3BBV1 942 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 GLRA4Q5JXX5 417 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 UBAP2Q5T6F2 1119 aaKnown RBP19.2■□□□□ 0.66
SHISA3-201ENST00000319234 C9orf57Q5W0N0 161 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 CXCL17Q6UXB2 119 aa19.2■□□□□ 0.66
SHISA3-201ENST00000319234 TRIP12Q14669 1992 aaPredicted RBP19.2■□□□□ 0.66
SHISA3-201ENST00000319234 SIGLEC16A6NMB1 481 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 PPEF2O14830 753 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 PGK1P00558 417 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 CD4P01730 458 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 RARBP10826 455 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 KCNE1P15382 129 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 ATF7P17544 494 aaPredicted RBP19.19■□□□□ 0.66
SHISA3-201ENST00000319234 SSR1P43307 286 aaKnown RBP19.19■□□□□ 0.66
SHISA3-201ENST00000319234 SLCO1A2P46721 670 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 MRPS6P82932 125 aaKnown RBP19.19■□□□□ 0.66
SHISA3-201ENST00000319234 PRKCZQ05513 592 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 ZNF252P-AS1Q0IIN9 211 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 SNX1Q13596 522 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 PIGHQ14442 188 aaPredicted RBP19.19■□□□□ 0.66
SHISA3-201ENST00000319234 RELL1Q8IUW5 271 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 EXD1Q8NHP7 514 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 UHMK1Q8TAS1 419 aaKnown RBP19.19■□□□□ 0.66
SHISA3-201ENST00000319234 FOXP3Q9BZS1 431 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 SNX9Q9Y5X1 595 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 SMIM28A0A1B0GU29 152 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 CCT8L1PA6NM43 557 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 M0QYV0 167 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 DNM1LO00429 736 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 DNAJC8O75937 253 aaPredicted RBP19.19■□□□□ 0.66
SHISA3-201ENST00000319234 GSTA1P08263 222 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 GPD2P43304 727 aa19.19■□□□□ 0.66
SHISA3-201ENST00000319234 SCTRP47872 440 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms