RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 MAGEB5Q9BZ81 275 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 ADAM22Q9P0K1 906 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 A0A0D9SFI3 127 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 ATP6V1G2O95670 118 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 GCLMP48507 274 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 CPT1AP50416 773 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 GPC5P78333 572 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 PI16Q6UXB8 463 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 IKBIPQ70UQ0 350 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 COPS7BQ9H9Q2 264 aaPredicted RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 GALNT8Q9NY28 637 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 SRPRBQ9Y5M8 271 aaKnown RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 RGS12O14924 1447 aa11.51□□□□□ -0.57
MSH6-201ENST00000234420 BLMP54132 1417 aaPredicted RBP11.51□□□□□ -0.57
MSH6-201ENST00000234420 FAM187AA6NFU0 413 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 NDUFS3O75489 264 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 CKMP06732 381 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 TYW3Q6IPR3 259 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 PPP1R2P3Q6NXS1 205 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 FAM160B2Q86V87 743 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 FRMD6Q96NE9 622 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 NUP85Q9BW27 656 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 GPN3Q9UHW5 284 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 CARMIL3Q8ND23 1372 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 S100A1P23297 94 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 CHI3L1P36222 383 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 MAPKAPK2P49137 400 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 ALDH9A1P49189 494 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 EFR3AQ14156 821 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 HIST1H2AGP0C0S8 130 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 HIST1H2ADP20671 130 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 RBBP4Q09028 425 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 EFHC2Q5JST6 749 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 CPB2Q96IY4 423 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 HIST1H2AHQ96KK5 128 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 HIST1H2AJQ99878 128 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 H2AFJQ9BTM1 129 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 CD2BP2O95400 341 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 GNA15P30679 374 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 PERM1Q5SV97 790 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 MYOCQ99972 504 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 RPRD1BQ9NQG5 326 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 FAM49BQ9NUQ9 324 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 TMEM260Q9NX78 707 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 SLC9A8Q9Y2E8 581 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 RAPGEF6Q8TEU7 1601 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 SCAMP3O14828 347 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 FGFR2P21802 821 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 COPAP53621 1224 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 ARF3P61204 181 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 ARF1P84077 181 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 RPS6KB2Q9UBS0 482 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 MEI4A8MW99 385 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 CCNE1P24864 410 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 YWHAQP27348 245 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 STARP49675 285 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 RPS7P62081 194 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 GRAPQ13588 217 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 SURF1Q15526 300 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 C12orf60Q5U649 245 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 ZNF746Q6NUN9 644 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 SLC7A14Q8TBB6 771 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 GRAPLQ8TC17 118 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 TRIM51Q9BSJ1 452 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 DCLRE1BQ9H816 532 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 CHMP1AQ9HD42 196 aaPredicted RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
MSH6-201ENST00000234420 TELO2Q9Y4R8 837 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 A0A1W2PP64 1363 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
MSH6-201ENST00000234420 TSPAN3O60637 253 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 PECAM1P16284 738 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 RASSF6Q6ZTQ3 369 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 PAGE5Q96GU1 130 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ZNF180Q9UJW8 692 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 NAGPAQ9UK23 515 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ABCC12Q96J65 1359 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 SCGNO76038 276 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ACAP1Q15027 740 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 SPANXN2Q5MJ10 180 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 FAM43BQ6ZT52 329 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 SLC44A5Q8NCS7 719 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 SIPA1Q96FS4 1042 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ZIM3Q96PE6 472 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 KLF6Q99612 283 aaPredicted RBP11.49□□□□□ -0.57
MSH6-201ENST00000234420 ECSITQ9BQ95 431 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ARHGAP9Q9BRR9 750 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 MLH3Q9UHC1 1453 aa11.49□□□□□ -0.57
MSH6-201ENST00000234420 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms