RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Pnma3Q8JZW8 466 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Mcoln2Q8K595 566 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Olfr348Q8VGK3 313 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Olfr345Q8VGK4 311 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Pard3bQ9CSB4 1203 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Pin4Q9CWW6 131 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Cnot8Q9D8X5 292 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Lrrc46Q9DAP0 323 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Gfra4Q9JJT2 260 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Trpv2Q9WTR1 756 aa15.52■□□□□ 0.08
Ercc1-201ENSMUST00000003645 Btbd18A0A0A6YY25 723 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Olfr1023A2ASU6 311 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 C6E9Q6D8 931 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pcsk6F6XJP7 959 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dcpp3L7N259 170 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 CaluO35887 315 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Scrg1O88745 98 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 PrnpP04925 254 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 TktP40142 623 aaKnown RBP15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Nr2c2P49117 596 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Aff3P51827 1254 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ctnnb1Q02248 781 aaKnown RBP15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Smarcd1Q61466 515 aaKnown RBP15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tlr11Q6R5P0 926 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 DstykQ6XUX1 927 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rnf168Q80XJ2 565 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ankrd45Q810N6 248 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 AarsQ8BGQ7 968 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam43aQ8BUP8 424 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Q8BZE1 841 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tph2Q8CGV2 488 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rassf9Q8K342 435 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cpa5Q8R4H4 436 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rpa3Q9CQ71 121 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Lgals2Q9CQW5 130 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Oaz3Q9R109 243 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Smarcb1Q9Z0H3 385 aa15.51■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam81bA0A140LI28 432 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gm4924A0A1B0GR71 966 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam209A2APA5 170 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gm1758F6VZZ1 202 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Vmn2r111K7N674 857 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gm3642K7N6V4 267 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Vmn2r77L7N2B7 854 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pja1O55176 578 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Yme1l1O88967 715 aaKnown RBP15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Odc1P00860 461 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mup5P11591 180 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pth1rP41593 591 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cul4aQ3TCH7 759 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ccdc125Q5U465 500 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Olfr8Q60892 310 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gstt1Q64471 240 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ttc24Q8BYG0 334 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Tmem145Q8C4U2 746 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Myef2Q8C854 591 aaKnown RBP15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 A430089I19RikQ8C9W1 407 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Snx9Q91VH2 595 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rxfp2Q91ZZ5 737 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Npffr2Q924H0 417 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Lpin3Q99PI4 848 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rpl17Q9CPR4 184 aaKnown RBP15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Dbndd2Q9CRD4 158 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Fam212aQ9CX62 282 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cfap57Q9D180 1249 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Pak1ip1Q9DCE5 382 aaKnown RBP15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rdh14Q9ERI6 334 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 IdeQ9JHR7 1019 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Akr1a1Q9JII6 325 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Noa1Q9JJG9 693 aaKnown RBP15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mta2Q9R190 668 aa15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Baz2aQ91YE5 1889 aaKnown RBP15.5■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ms4a14A0A087WSD2 1232 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Zscan4dA7KBS4 506 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cpsf2O35218 782 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Flt3lgP49772 232 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Mxi1P50540 228 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 GssP51855 474 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 CtswP56203 371 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Arpp19P56212 112 aaKnown RBP15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Frat1P70339 274 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Zscan4fQ3URS2 506 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 B020004J07RikQ3UTC0 476 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 H2-Q2Q4KN81 360 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Shroom1Q5SX79 823 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Acvrl1Q61288 502 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Wdr44Q6NVE8 915 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Prrt3Q6PE13 971 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gpr142Q7TQN9 365 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Ctdp1Q7TSG2 960 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Zscan4cQ80VJ6 506 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 PdhxQ8BKZ9 501 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Rps6kc1Q8BLK9 1056 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Neto2Q8BNJ6 525 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Slc13a4Q8BZ82 625 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Gpc5Q8CAL5 572 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Cyp2d26Q8CIM7 500 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Slc35f5Q8R314 524 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Lims2Q91XD2 341 aa15.49■□□□□ 0.07
Ercc1-201ENSMUST00000003645 Uap1Q91YN5 522 aa15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms