RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W YKR070WP36151 352 aaKnown RBP1.15□□□□□ -2.23
CTF4YPR135W ERJ5P43613 295 aaPredicted RBP1.15□□□□□ -2.23
CTF4YPR135W OST2P46964 130 aa1.15□□□□□ -2.23
CTF4YPR135W GON7P46984 123 aa1.15□□□□□ -2.23
CTF4YPR135W PIR5P46999 287 aa1.15□□□□□ -2.23
CTF4YPR135W ALG9P53868 555 aaKnown RBP1.15□□□□□ -2.23
CTF4YPR135W DIG2Q03373 323 aaKnown RBP1.15□□□□□ -2.23
CTF4YPR135W PHO13P19881 312 aa1.14□□□□□ -2.23
CTF4YPR135W CCA1P21269 546 aa1.14□□□□□ -2.23
CTF4YPR135W MRP49P32388 137 aa1.14□□□□□ -2.23
CTF4YPR135W RPS20P38701 121 aaKnown RBP1.14□□□□□ -2.23
CTF4YPR135W FCY21P40039 528 aa1.14□□□□□ -2.23
CTF4YPR135W YFR045WP43617 309 aa1.14□□□□□ -2.23
CTF4YPR135W YLR099W-AQ3E798 87 aa1.14□□□□□ -2.23
CTF4YPR135W YEL009C-AA0A023PZF2 135 aa1.14□□□□□ -2.23
CTF4YPR135W HIS3P06633 220 aa1.14□□□□□ -2.23
CTF4YPR135W PAN3P36102 679 aaPredicted RBP1.14□□□□□ -2.23
CTF4YPR135W RPL14AP36105 138 aaKnown RBP1.14□□□□□ -2.23
CTF4YPR135W RPL14BP38754 138 aaKnown RBP1.14□□□□□ -2.23
CTF4YPR135W YHR140WP38842 239 aa1.14□□□□□ -2.23
CTF4YPR135W ARC15P40518 154 aaRIP-Chip data1.14□□□□□ -2.23not detected
CTF4YPR135W YNR062CP53748 327 aa1.14□□□□□ -2.23
CTF4YPR135W GAL83Q04739 417 aa1.14□□□□□ -2.23
CTF4YPR135W ATP20Q12233 115 aa1.14□□□□□ -2.23
CTF4YPR135W YLR412C-AQ3E742 68 aa1.14□□□□□ -2.23
CTF4YPR135W YMR105W-AQ8TGS8 64 aa1.14□□□□□ -2.23
CTF4YPR135W ODC2Q99297 307 aa1.14□□□□□ -2.23
CTF4YPR135W YOR304C-AO14468 76 aa1.13□□□□□ -2.23
CTF4YPR135W POR1P04840 283 aaKnown RBP1.13□□□□□ -2.23
CTF4YPR135W TIR1P10863 254 aa1.13□□□□□ -2.23
CTF4YPR135W PCL1P24867 279 aa1.13□□□□□ -2.23
CTF4YPR135W YER134CP40081 178 aa1.13□□□□□ -2.23
CTF4YPR135W PGD1P40356 397 aa1.13□□□□□ -2.23
CTF4YPR135W FLX1P40464 311 aa1.13□□□□□ -2.23
CTF4YPR135W YIR035CP40579 254 aa1.13□□□□□ -2.23
CTF4YPR135W ARL3Q02804 198 aa1.13□□□□□ -2.23
CTF4YPR135W YMR099CQ03161 297 aaKnown RBP1.13□□□□□ -2.23
CTF4YPR135W SLO1Q3E784 85 aa1.13□□□□□ -2.23
CTF4YPR135W FMP49A0A023PZB3 126 aa1.13□□□□□ -2.23
CTF4YPR135W KIN28P06242 306 aa1.13□□□□□ -2.23
CTF4YPR135W NMT1P14743 455 aa1.13□□□□□ -2.23
CTF4YPR135W SHE2P36068 246 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
CTF4YPR135W SRL3P36167 246 aa1.13□□□□□ -2.23
CTF4YPR135W SKG1P36169 355 aa1.13□□□□□ -2.23
CTF4YPR135W GVP36P40531 326 aaKnown RBP1.13□□□□□ -2.23
CTF4YPR135W SFT1P43682 97 aa1.13□□□□□ -2.23
CTF4YPR135W XPT1P47165 209 aa1.13□□□□□ -2.23
CTF4YPR135W PAC10P48363 199 aa1.13□□□□□ -2.23
CTF4YPR135W AIF1P52923 378 aa1.13□□□□□ -2.23
CTF4YPR135W YDR102CQ03864 110 aa1.13□□□□□ -2.23
CTF4YPR135W HOR7Q05827 59 aa1.13□□□□□ -2.23
CTF4YPR135W SPC3Q12133 184 aa1.13□□□□□ -2.23
CTF4YPR135W MRS4P23500 304 aa1.13□□□□□ -2.23
CTF4YPR135W YCR101CP25607 182 aa1.13□□□□□ -2.23
CTF4YPR135W MRPL24P36525 258 aaPredicted RBP1.13□□□□□ -2.23
CTF4YPR135W NRG2P38082 220 aa1.13□□□□□ -2.23
CTF4YPR135W YJL027CP47063 138 aaPredicted RBP1.13□□□□□ -2.23
CTF4YPR135W VPS55P47111 140 aa1.13□□□□□ -2.23
CTF4YPR135W YGL193CP53097 103 aa1.13□□□□□ -2.23
CTF4YPR135W YNR077CP53758 84 aa1.13□□□□□ -2.23
CTF4YPR135W BUD25P85052 153 aa1.13□□□□□ -2.23
CTF4YPR135W YDR366CP87287 132 aa1.13□□□□□ -2.23
CTF4YPR135W YKR005CQ02203 525 aa1.13□□□□□ -2.23
CTF4YPR135W ADH3P07246 375 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W DDR48P18899 430 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W SRP21P32342 167 aa1.12□□□□□ -2.23
CTF4YPR135W SHB17P36136 271 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W CNL1Q06333 122 aa1.12□□□□□ -2.23
CTF4YPR135W ANT1Q06497 328 aa1.12□□□□□ -2.23
CTF4YPR135W RDS3Q06835 107 aaPredicted RBP1.12□□□□□ -2.23
CTF4YPR135W PHO85P17157 305 aa1.12□□□□□ -2.23
CTF4YPR135W YBL010CP32788 280 aa1.12□□□□□ -2.23
CTF4YPR135W GSP1P32835 219 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W GSP2P32836 220 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W GPI2P46961 280 aa1.12□□□□□ -2.23
CTF4YPR135W DOC1P53068 250 aa1.12□□□□□ -2.23
CTF4YPR135W YGR039WP53225 103 aa1.12□□□□□ -2.23
CTF4YPR135W HHO1P53551 258 aa1.12□□□□□ -2.23
CTF4YPR135W RPL22BP56628 122 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W EST3Q03096 181 aa1.12□□□□□ -2.23
CTF4YPR135W YHP1Q04116 353 aa1.12□□□□□ -2.23
CTF4YPR135W SYM1Q06563 197 aa1.12□□□□□ -2.23
CTF4YPR135W PRM3Q08931 133 aa1.12□□□□□ -2.23
CTF4YPR135W FSF1Q12029 327 aaKnown RBP1.12□□□□□ -2.23
CTF4YPR135W IES3Q12345 250 aa1.12□□□□□ -2.23
CTF4YPR135W ATP14Q12349 124 aa1.12□□□□□ -2.23
CTF4YPR135W YOL162WP0CF19 215 aa1.11□□□□□ -2.23
CTF4YPR135W ECM31P38122 312 aa1.11□□□□□ -2.23
CTF4YPR135W RRT1P38192 103 aa1.11□□□□□ -2.23
CTF4YPR135W HTD2P38790 280 aaKnown RBP1.11□□□□□ -2.23
CTF4YPR135W VMA7P39111 118 aa1.11□□□□□ -2.23
CTF4YPR135W SPC25P40014 221 aa1.11□□□□□ -2.23
CTF4YPR135W DSK2P48510 373 aa1.11□□□□□ -2.23
CTF4YPR135W SBH1P52870 82 aa1.11□□□□□ -2.23
CTF4YPR135W SDH7Q04401 133 aa1.11□□□□□ -2.23
CTF4YPR135W TVP18Q04767 167 aa1.11□□□□□ -2.23
CTF4YPR135W SAS5Q99314 248 aa1.11□□□□□ -2.23
CTF4YPR135W RPC19P28000 142 aaKnown RBP1.11□□□□□ -2.23
CTF4YPR135W TFC1P32367 649 aa1.11□□□□□ -2.23
CTF4YPR135W UTP11P34247 250 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 216.5 ms