RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C COX16P47081 118 aa4.3□□□□□ -1.72
RAT1YOR048C YGL260WP53056 76 aa4.3□□□□□ -1.72
RAT1YOR048C PIN2Q12057 282 aa4.3□□□□□ -1.72
RAT1YOR048C MBB1P39534 108 aa4.29□□□□□ -1.72
RAT1YOR048C GTO3Q04806 366 aa4.29□□□□□ -1.72
RAT1YOR048C RPS22BQ3E7Y3 130 aaKnown RBP4.29□□□□□ -1.72
RAT1YOR048C FEN2P25621 512 aaKnown RBP4.29□□□□□ -1.72
RAT1YOR048C VHS2P40463 436 aa4.29□□□□□ -1.72
RAT1YOR048C YFR057WP43625 151 aa4.29□□□□□ -1.72
RAT1YOR048C ATG39Q06159 398 aa4.29□□□□□ -1.72
RAT1YOR048C GEP3Q08622 556 aa4.29□□□□□ -1.72
RAT1YOR048C YDL009CQ12210 107 aa4.29□□□□□ -1.72
RAT1YOR048C YOL085CQ99345 113 aa4.29□□□□□ -1.72
RAT1YOR048C YBR056W-AI2HB52 66 aa4.29□□□□□ -1.72
RAT1YOR048C CYC3P06182 269 aa4.29□□□□□ -1.72
RAT1YOR048C YDL022C-AP0C5L6 82 aa4.29□□□□□ -1.72
RAT1YOR048C HMRA1P0CY11 126 aa4.29□□□□□ -1.72
RAT1YOR048C MDM10P18409 493 aa4.29□□□□□ -1.72
RAT1YOR048C YGL118CP53132 145 aa4.29□□□□□ -1.72
RAT1YOR048C VPS71Q03433 280 aa4.29□□□□□ -1.72
RAT1YOR048C CNL1Q06333 122 aa4.29□□□□□ -1.72
RAT1YOR048C DGA1Q08650 418 aa4.29□□□□□ -1.72
RAT1YOR048C YPT10P38146 199 aa4.28□□□□□ -1.72
RAT1YOR048C CAB4P53332 305 aa4.28□□□□□ -1.72
RAT1YOR048C ATP19P81451 68 aa4.28□□□□□ -1.72
RAT1YOR048C DAD1Q12248 94 aa4.28□□□□□ -1.72
RAT1YOR048C YHR213WP0CI67 198 aa4.28□□□□□ -1.72
RAT1YOR048C YER121WP40076 114 aa4.28□□□□□ -1.72
RAT1YOR048C CPT1P17898 393 aa4.27□□□□□ -1.73
RAT1YOR048C GAR1P28007 205 aaKnown RBP4.27□□□□□ -1.73
RAT1YOR048C MID2P36027 376 aa4.27□□□□□ -1.73
RAT1YOR048C ATP23P53722 227 aa4.27□□□□□ -1.73
RAT1YOR048C MOT3P54785 490 aaKnown RBP4.27□□□□□ -1.73
RAT1YOR048C ADH6Q04894 360 aaKnown RBP4.27□□□□□ -1.73
RAT1YOR048C MOH1P38191 138 aa4.27□□□□□ -1.73
RAT1YOR048C YEL067CP39978 195 aa4.27□□□□□ -1.73
RAT1YOR048C LCB3P47013 409 aa4.27□□□□□ -1.73
RAT1YOR048C HST4P53688 370 aa4.27□□□□□ -1.73
RAT1YOR048C YFL068WP0CX99 160 aa4.27□□□□□ -1.73
RAT1YOR048C YLL066W-AP0CY00 160 aa4.27□□□□□ -1.73
RAT1YOR048C YLL067W-AP0CY01 160 aa4.27□□□□□ -1.73
RAT1YOR048C SPS100P13130 326 aa4.27□□□□□ -1.73
RAT1YOR048C AIM29P36154 155 aa4.27□□□□□ -1.73
RAT1YOR048C ADH5P38113 351 aaKnown RBP4.27□□□□□ -1.73
RAT1YOR048C MSA1Q08471 629 aa4.27□□□□□ -1.73
RAT1YOR048C YLR363W-AQ3E747 85 aa4.27□□□□□ -1.73
RAT1YOR048C RPS23AP0CX29 145 aaKnown RBP4.26□□□□□ -1.73
RAT1YOR048C RPS23BP0CX30 145 aa4.26□□□□□ -1.73
RAT1YOR048C RPB10P22139 70 aa4.26□□□□□ -1.73
RAT1YOR048C DAL80P26343 269 aa4.26□□□□□ -1.73
RAT1YOR048C SOH1P38633 127 aa4.26□□□□□ -1.73
RAT1YOR048C YJL118WP47022 219 aa4.26□□□□□ -1.73
RAT1YOR048C PBP4Q07362 185 aaKnown RBP4.26□□□□□ -1.73
RAT1YOR048C YPL257WQ08974 193 aa4.26□□□□□ -1.73
RAT1YOR048C ADH1P00330 348 aaKnown RBP4.26□□□□□ -1.73
RAT1YOR048C SNF11P38956 169 aa4.25□□□□□ -1.73
RAT1YOR048C GPP2P40106 250 aaKnown RBP4.25□□□□□ -1.73
RAT1YOR048C MST27P53176 234 aa4.25□□□□□ -1.73
RAT1YOR048C TIR1P10863 254 aa4.25□□□□□ -1.73
RAT1YOR048C YJL163CP46996 555 aa4.25□□□□□ -1.73
RAT1YOR048C SSU72P53538 206 aaPredicted RBP4.25□□□□□ -1.73
RAT1YOR048C MRX11Q03079 207 aa4.25□□□□□ -1.73
RAT1YOR048C YMR103CQ04436 120 aa4.25□□□□□ -1.73
RAT1YOR048C IMP2P46972 177 aa4.24□□□□□ -1.73
RAT1YOR048C BET5Q03630 159 aa4.24□□□□□ -1.73
RAT1YOR048C YOL160WQ08321 113 aa4.24□□□□□ -1.73
RAT1YOR048C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
RAT1YOR048C PAU7P39545 55 aa4.24□□□□□ -1.73
RAT1YOR048C GZF3P42944 551 aaKnown RBP4.24□□□□□ -1.73
RAT1YOR048C BNA1P47096 177 aa4.24□□□□□ -1.73
RAT1YOR048C SNA4Q07549 140 aa4.24□□□□□ -1.73
RAT1YOR048C VTC1P40046 129 aaRIP-Chip data4.24□□□□□ -1.73 RIP-Chip
RAT1YOR048C PRM7Q12459 698 aa4.24□□□□□ -1.73
RAT1YOR048C MST28P39552 234 aa4.23□□□□□ -1.73
RAT1YOR048C SLO1Q3E784 85 aa4.23□□□□□ -1.73
RAT1YOR048C YPL229WQ99395 206 aa4.23□□□□□ -1.73
RAT1YOR048C HMRA2P0CY13 119 aa4.23□□□□□ -1.73
RAT1YOR048C MRPL38P35996 138 aaPredicted RBP4.23□□□□□ -1.73
RAT1YOR048C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
RAT1YOR048C CPR1P14832 162 aaKnown RBP4.22□□□□□ -1.73
RAT1YOR048C APS1P35181 156 aa4.22□□□□□ -1.73
RAT1YOR048C YJL027CP47063 138 aaPredicted RBP4.22□□□□□ -1.73
RAT1YOR048C MIX17Q03667 156 aa4.22□□□□□ -1.73
RAT1YOR048C AIM34Q03673 198 aa4.22□□□□□ -1.73
RAT1YOR048C MEC1P38111 2368 aa4.22□□□□□ -1.73
RAT1YOR048C PAI3P01094 68 aa4.22□□□□□ -1.73
RAT1YOR048C YCR023CP25351 611 aa4.22□□□□□ -1.73
RAT1YOR048C RRT1P38192 103 aa4.22□□□□□ -1.73
RAT1YOR048C YGR045CP53229 120 aa4.22□□□□□ -1.73
RAT1YOR048C YNR064CP53750 290 aa4.22□□□□□ -1.73
RAT1YOR048C TMC1Q08422 150 aaPredicted RBP4.22□□□□□ -1.73
RAT1YOR048C HYP2P23301 157 aaKnown RBP4.21□□□□□ -1.73
RAT1YOR048C NCA3P46955 337 aa4.21□□□□□ -1.73
RAT1YOR048C RPP2BP02400 110 aaKnown RBP4.21□□□□□ -1.74
RAT1YOR048C AQY1P0CD91 305 aa4.21□□□□□ -1.74
RAT1YOR048C YIL012WP40551 113 aa4.21□□□□□ -1.74
RAT1YOR048C ECM33P38248 429 aaKnown RBP4.21□□□□□ -1.74
RAT1YOR048C YJR096WP47137 282 aa4.21□□□□□ -1.74
RAT1YOR048C YNL184CP53876 108 aa4.21□□□□□ -1.74
RAT1YOR048C SDH7Q04401 133 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms