RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C IRC22P40006 225 aa4□□□□□ -1.77
NUP116YMR047C UBC13P52490 153 aa4□□□□□ -1.77
NUP116YMR047C YDR102CQ03864 110 aa4□□□□□ -1.77
NUP116YMR047C GPI19Q04082 140 aa4□□□□□ -1.77
NUP116YMR047C YGL010WP25338 174 aa4□□□□□ -1.77
NUP116YMR047C SRP21P32342 167 aa4□□□□□ -1.77
NUP116YMR047C YKL102CP34249 101 aa4□□□□□ -1.77
NUP116YMR047C YBR063CP38083 404 aa3.99□□□□□ -1.77
NUP116YMR047C ECM14P38836 430 aa3.99□□□□□ -1.77
NUP116YMR047C PAU5P43575 122 aa3.99□□□□□ -1.77
NUP116YMR047C SBH1P52870 82 aa3.99□□□□□ -1.77
NUP116YMR047C CCW14O13547 238 aa3.99□□□□□ -1.77
NUP116YMR047C INO2P26798 304 aa3.99□□□□□ -1.77
NUP116YMR047C FLO5P38894 1075 aa3.99□□□□□ -1.77
NUP116YMR047C MST28P39552 234 aa3.99□□□□□ -1.77
NUP116YMR047C AIR1P40507 360 aaKnown RBP3.99□□□□□ -1.77
NUP116YMR047C MMS2P53152 137 aa3.99□□□□□ -1.77
NUP116YMR047C YMR103CQ04436 120 aa3.99□□□□□ -1.77
NUP116YMR047C UPS1Q05776 175 aa3.99□□□□□ -1.77
NUP116YMR047C DGA1Q08650 418 aa3.99□□□□□ -1.77
NUP116YMR047C ATO3Q12359 275 aa3.99□□□□□ -1.77
NUP116YMR047C URA5P13298 226 aaKnown RBP3.98□□□□□ -1.77
NUP116YMR047C CNE1P27825 502 aa3.98□□□□□ -1.77
NUP116YMR047C BRR6P53062 197 aa3.98□□□□□ -1.77
NUP116YMR047C YPL162CQ12042 273 aa3.98□□□□□ -1.77
NUP116YMR047C YBR126W-AQ8TGU7 68 aa3.98□□□□□ -1.77
NUP116YMR047C ATG40Q99325 256 aa3.98□□□□□ -1.77
NUP116YMR047C ERG24P32462 438 aaKnown RBP3.98□□□□□ -1.77
NUP116YMR047C PAM17P36147 197 aa3.98□□□□□ -1.77
NUP116YMR047C COF1Q03048 143 aaKnown RBP3.98□□□□□ -1.77
NUP116YMR047C COX19Q3E731 98 aa3.98□□□□□ -1.77
NUP116YMR047C MSL1P40567 111 aaPredicted RBP3.98□□□□□ -1.77
NUP116YMR047C YNR071CP53757 342 aa3.98□□□□□ -1.77
NUP116YMR047C YMR252CQ04814 134 aa3.98□□□□□ -1.77
NUP116YMR047C YLR346CQ06139 101 aa3.98□□□□□ -1.77
NUP116YMR047C CDC39P25655 2108 aaKnown RBP3.97□□□□□ -1.77
NUP116YMR047C RPL30P14120 105 aaKnown RBP3.97□□□□□ -1.77
NUP116YMR047C MDM10P18409 493 aa3.97□□□□□ -1.77
NUP116YMR047C YAR029WP39549 74 aa3.97□□□□□ -1.77
NUP116YMR047C PEX22P39718 180 aa3.97□□□□□ -1.77
NUP116YMR047C FMP49A0A023PZB3 126 aa3.97□□□□□ -1.77
NUP116YMR047C GLE2P40066 365 aa3.97□□□□□ -1.77
NUP116YMR047C YJL213WP40896 331 aa3.97□□□□□ -1.77
NUP116YMR047C MID1P41821 548 aa3.97□□□□□ -1.77
NUP116YMR047C NRG1Q03125 231 aa3.97□□□□□ -1.77
NUP116YMR047C YLR363W-AQ3E747 85 aa3.97□□□□□ -1.77
NUP116YMR047C SEC11P15367 167 aa3.96□□□□□ -1.77
NUP116YMR047C SHE1P38200 338 aa3.96□□□□□ -1.77
NUP116YMR047C CYB5P40312 120 aa3.96□□□□□ -1.77
NUP116YMR047C RAV2Q03956 351 aa3.96□□□□□ -1.77
NUP116YMR047C STP4Q07351 490 aa3.96□□□□□ -1.77
NUP116YMR047C RPS13P05756 151 aaKnown RBP3.96□□□□□ -1.78
NUP116YMR047C RPL2AP0CX45 254 aaKnown RBP3.96□□□□□ -1.78
NUP116YMR047C RPL2BP0CX46 254 aaKnown RBP3.96□□□□□ -1.78
NUP116YMR047C POP8P38208 133 aa3.96□□□□□ -1.78
NUP116YMR047C YFR045WP43617 309 aa3.96□□□□□ -1.78
NUP116YMR047C YGL262WP53054 175 aa3.96□□□□□ -1.78
NUP116YMR047C YDR042CQ03205 200 aa3.96□□□□□ -1.78
NUP116YMR047C ECM12O13529 151 aa3.96□□□□□ -1.78
NUP116YMR047C PAU2P32612 120 aa3.96□□□□□ -1.78
NUP116YMR047C UMP1P38293 148 aa3.96□□□□□ -1.78
NUP116YMR047C GLO1P50107 326 aa3.96□□□□□ -1.78
NUP116YMR047C YMR166CQ03829 368 aa3.96□□□□□ -1.78
NUP116YMR047C UTP15Q04305 513 aaKnown RBP3.96□□□□□ -1.78
NUP116YMR047C MSA1Q08471 629 aa3.96□□□□□ -1.78
NUP116YMR047C DAD1Q12248 94 aa3.96□□□□□ -1.78
NUP116YMR047C AIM11P87275 137 aa3.95□□□□□ -1.78
NUP116YMR047C YPS3Q12303 508 aa3.95□□□□□ -1.78
NUP116YMR047C RPB11P38902 120 aa3.95□□□□□ -1.78
NUP116YMR047C YNR064CP53750 290 aa3.95□□□□□ -1.78
NUP116YMR047C VPS71Q03433 280 aa3.95□□□□□ -1.78
NUP116YMR047C YLR146W-AQ2V2P1 62 aa3.95□□□□□ -1.78
NUP116YMR047C DIF1O13577 133 aa3.95□□□□□ -1.78
NUP116YMR047C RPL18AP0CX49 186 aaKnown RBP3.95□□□□□ -1.78
NUP116YMR047C RPL18BP0CX50 186 aaKnown RBP3.95□□□□□ -1.78
NUP116YMR047C PAU16P35994 123 aa3.95□□□□□ -1.78
NUP116YMR047C BUD25P85052 153 aa3.95□□□□□ -1.78
NUP116YMR047C RRT15Q3E811 62 aa3.95□□□□□ -1.78
NUP116YMR047C MRS1P07266 363 aa3.94□□□□□ -1.78
NUP116YMR047C YCR085WP25650 117 aa3.94□□□□□ -1.78
NUP116YMR047C YIL102C-AQ2V2P5 75 aa3.94□□□□□ -1.78
NUP116YMR047C YRA2P36036 203 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
NUP116YMR047C YDR119W-AQ2V2P9 66 aa3.94□□□□□ -1.78
NUP116YMR047C YCR024C-BQ3E7Z8 88 aa3.94□□□□□ -1.78
NUP116YMR047C YEA4P40004 342 aa3.93□□□□□ -1.78
NUP116YMR047C YOR376W-AQ3E805 51 aa3.93□□□□□ -1.78
NUP116YMR047C ENV10Q99382 181 aa3.93□□□□□ -1.78
NUP116YMR047C DSK2P48510 373 aa3.93□□□□□ -1.78
NUP116YMR047C YGL034CP53186 121 aa3.93□□□□□ -1.78
NUP116YMR047C YCL048W-AQ2V2Q2 79 aa3.93□□□□□ -1.78
NUP116YMR047C BUD8P41698 603 aa3.93□□□□□ -1.78
NUP116YMR047C RFM1Q12192 310 aa3.93□□□□□ -1.78
NUP116YMR047C YCR050CP25630 102 aa3.92□□□□□ -1.78
NUP116YMR047C PAU24P38155 120 aa3.92□□□□□ -1.78
NUP116YMR047C YLR281CQ05863 155 aa3.92□□□□□ -1.78
NUP116YMR047C RNH203Q12338 110 aa3.92□□□□□ -1.78
NUP116YMR047C MID2P36027 376 aa3.92□□□□□ -1.78
NUP116YMR047C YBR292CP38357 123 aa3.92□□□□□ -1.78
NUP116YMR047C RPL21AQ02753 160 aaKnown RBP3.92□□□□□ -1.78
NUP116YMR047C RPL21BQ12672 160 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 184.9 ms