RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W CPA1P07258 411 aaKnown RBP1.7□□□□□ -2.14
NUP100YKL068W SEC59P20048 519 aa1.7□□□□□ -2.14
NUP100YKL068W SDH4P37298 181 aa1.7□□□□□ -2.14
NUP100YKL068W PHS1P40857 217 aa1.7□□□□□ -2.14
NUP100YKL068W DSK2P48510 373 aa1.7□□□□□ -2.14
NUP100YKL068W COX4P04037 155 aa1.69□□□□□ -2.14
NUP100YKL068W POR1P04840 283 aaKnown RBP1.69□□□□□ -2.14
NUP100YKL068W UBC5P15732 148 aa1.69□□□□□ -2.14
NUP100YKL068W MRPL15P36523 253 aa1.69□□□□□ -2.14
NUP100YKL068W YBR090CP38253 122 aa1.69□□□□□ -2.14
NUP100YKL068W GEP7P53171 287 aa1.69□□□□□ -2.14
NUP100YKL068W YNR062CP53748 327 aa1.69□□□□□ -2.14
NUP100YKL068W DAD3P69850 94 aa1.69□□□□□ -2.14
NUP100YKL068W SMD1Q02260 146 aaPredicted RBP1.69□□□□□ -2.14
NUP100YKL068W RIM9Q04734 239 aa1.69□□□□□ -2.14
NUP100YKL068W TVP18Q04767 167 aa1.69□□□□□ -2.14
NUP100YKL068W UPS1Q05776 175 aa1.69□□□□□ -2.14
NUP100YKL068W SPT15P13393 240 aaKnown RBP1.69□□□□□ -2.14
NUP100YKL068W KRE9P39005 276 aa1.69□□□□□ -2.14
NUP100YKL068W ECO1P43605 281 aa1.69□□□□□ -2.14
NUP100YKL068W DIE2P50076 525 aa1.69□□□□□ -2.14
NUP100YKL068W ATP20Q12233 115 aa1.69□□□□□ -2.14
NUP100YKL068W YOL085CQ99345 113 aa1.69□□□□□ -2.14
NUP100YKL068W NOP1P15646 327 aaKnown RBP1.69□□□□□ -2.14
NUP100YKL068W ECM34P38728 170 aa1.69□□□□□ -2.14
NUP100YKL068W YER135CP40082 130 aa1.69□□□□□ -2.14
NUP100YKL068W YER188WP40103 239 aa1.69□□□□□ -2.14
NUP100YKL068W GON7P46984 123 aa1.69□□□□□ -2.14
NUP100YKL068W ELC1Q03071 99 aa1.69□□□□□ -2.14
NUP100YKL068W YMR252CQ04814 134 aa1.69□□□□□ -2.14
NUP100YKL068W PIN3Q06449 215 aa1.69□□□□□ -2.14
NUP100YKL068W FCF2Q12035 217 aaPredicted RBP1.69□□□□□ -2.14
NUP100YKL068W ODC2Q99297 307 aa1.69□□□□□ -2.14
NUP100YKL068W DDR48P18899 430 aaKnown RBP1.68□□□□□ -2.14
NUP100YKL068W ANB1P19211 157 aa1.68□□□□□ -2.14
NUP100YKL068W MRPL27P36526 146 aaPredicted RBP1.68□□□□□ -2.14
NUP100YKL068W RPB11P38902 120 aa1.68□□□□□ -2.14
NUP100YKL068W NSA2P40078 261 aaKnown RBP1.68□□□□□ -2.14
NUP100YKL068W MPM1P40364 252 aa1.68□□□□□ -2.14
NUP100YKL068W GVP36P40531 326 aaKnown RBP1.68□□□□□ -2.14
NUP100YKL068W MPC3P53311 146 aa1.68□□□□□ -2.14
NUP100YKL068W FEX1Q08913 375 aa1.68□□□□□ -2.14
NUP100YKL068W FEX2Q08991 375 aa1.68□□□□□ -2.14
NUP100YKL068W PPT2Q12036 173 aa1.68□□□□□ -2.14
NUP100YKL068W PAM17P36147 197 aa1.68□□□□□ -2.14
NUP100YKL068W YEA6P39953 335 aa1.68□□□□□ -2.14
NUP100YKL068W SPC25P40014 221 aa1.68□□□□□ -2.14
NUP100YKL068W RIO2P40160 425 aaKnown RBP1.68□□□□□ -2.14
NUP100YKL068W CUP9P41817 306 aa1.68□□□□□ -2.14
NUP100YKL068W BAT2P47176 376 aaKnown RBP1.68□□□□□ -2.14
NUP100YKL068W RSM27P53305 110 aa1.68□□□□□ -2.14
NUP100YKL068W SAY1P53324 424 aa1.68□□□□□ -2.14
NUP100YKL068W MRPS8Q03799 155 aa1.68□□□□□ -2.14
NUP100YKL068W YDR102CQ03864 110 aa1.68□□□□□ -2.14
NUP100YKL068W HAP3P13434 144 aa1.67□□□□□ -2.14
NUP100YKL068W ARO2P28777 376 aaKnown RBP1.67□□□□□ -2.14
NUP100YKL068W UMP1P38293 148 aa1.67□□□□□ -2.14
NUP100YKL068W YNR064CP53750 290 aa1.67□□□□□ -2.14
NUP100YKL068W NHP10Q03435 203 aa1.67□□□□□ -2.14
NUP100YKL068W RCE1Q03530 315 aa1.67□□□□□ -2.14
NUP100YKL068W FCF1Q05498 189 aaPredicted RBP1.67□□□□□ -2.14
NUP100YKL068W YCR050CP25630 102 aa1.67□□□□□ -2.14
NUP100YKL068W SRL3P36167 246 aa1.67□□□□□ -2.14
NUP100YKL068W RRT1P38192 103 aa1.67□□□□□ -2.14
NUP100YKL068W YAR029WP39549 74 aa1.67□□□□□ -2.14
NUP100YKL068W SMD3P43321 101 aaKnown RBP1.67□□□□□ -2.14
NUP100YKL068W MRPS16Q02608 121 aa1.67□□□□□ -2.14
NUP100YKL068W YMR295CQ03559 197 aa1.67□□□□□ -2.14
NUP100YKL068W YOR376W-AQ3E805 51 aa1.67□□□□□ -2.14
NUP100YKL068W YBR298C-AQ8TGK4 73 aa1.67□□□□□ -2.14
NUP100YKL068W DDP1Q99321 188 aaKnown RBP1.67□□□□□ -2.14
NUP100YKL068W PHO88P38264 188 aaPredicted RBP1.66□□□□□ -2.14
NUP100YKL068W HAL1Q01766 294 aa1.66□□□□□ -2.14
NUP100YKL068W LIP1Q03579 150 aa1.66□□□□□ -2.14
NUP100YKL068W RRT7Q07829 113 aa1.66□□□□□ -2.14
NUP100YKL068W PEX4P29340 183 aa1.66□□□□□ -2.14
NUP100YKL068W GNA1P43577 159 aaPredicted RBP1.66□□□□□ -2.14
NUP100YKL068W YGR164WP53291 111 aa1.66□□□□□ -2.14
NUP100YKL068W CSI2Q08054 341 aa1.66□□□□□ -2.14
NUP100YKL068W UIP4Q08926 304 aa1.66□□□□□ -2.14
NUP100YKL068W YCR075W-AQ3E830 75 aa1.66□□□□□ -2.14
NUP100YKL068W FZF1P32805 299 aa1.65□□□□□ -2.14
NUP100YKL068W NSE4P43124 402 aa1.65□□□□□ -2.14
NUP100YKL068W SAS5Q99314 248 aa1.65□□□□□ -2.14
NUP100YKL068W STT4P37297 1900 aa1.65□□□□□ -2.14
NUP100YKL068W MDH2P22133 377 aa1.65□□□□□ -2.15
NUP100YKL068W YET1P35723 206 aa1.65□□□□□ -2.15
NUP100YKL068W ERV15P38312 142 aa1.65□□□□□ -2.15
NUP100YKL068W SPG1P50088 95 aa1.65□□□□□ -2.15
NUP100YKL068W YNR077CP53758 84 aa1.65□□□□□ -2.15
NUP100YKL068W SCP1Q08873 200 aa1.65□□□□□ -2.15
NUP100YKL068W YMR230W-AQ3E7B5 62 aa1.65□□□□□ -2.15
NUP100YKL068W MSW1P04803 379 aa1.65□□□□□ -2.15
NUP100YKL068W HYP2P23301 157 aaKnown RBP1.65□□□□□ -2.15
NUP100YKL068W MID2P36027 376 aa1.65□□□□□ -2.15
NUP100YKL068W YKR032WP36127 104 aa1.65□□□□□ -2.15
NUP100YKL068W YAL064WP39711 94 aa1.65□□□□□ -2.15
NUP100YKL068W YNL217WP40152 326 aa1.65□□□□□ -2.15
NUP100YKL068W PAM16P42949 149 aa1.65□□□□□ -2.15
NUP100YKL068W YMR103CQ04436 120 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms