RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W SHH3Q04487 196 aa1.62□□□□□ -2.15
VPS41YDR080W DPP1Q05521 289 aa1.62□□□□□ -2.15
VPS41YDR080W PRR2Q12310 699 aa1.62□□□□□ -2.15
VPS41YDR080W MRS1P07266 363 aa1.62□□□□□ -2.15
VPS41YDR080W SUA5P32579 426 aa1.62□□□□□ -2.15
VPS41YDR080W MRPL28P36527 147 aa1.62□□□□□ -2.15
VPS41YDR080W YGR269WP40326 108 aa1.62□□□□□ -2.15
VPS41YDR080W TPN1P53099 579 aa1.62□□□□□ -2.15
VPS41YDR080W VPS28Q02767 242 aa1.62□□□□□ -2.15
VPS41YDR080W YMR090WQ04304 227 aaKnown RBP1.62□□□□□ -2.15
VPS41YDR080W AIM45Q12480 344 aaKnown RBP1.62□□□□□ -2.15
VPS41YDR080W YHR213W-AQ8TGT4 77 aa1.62□□□□□ -2.15
VPS41YDR080W RPS25BP0C0T4 108 aaKnown RBP1.62□□□□□ -2.15
VPS41YDR080W NHP6BP11633 99 aaKnown RBP1.62□□□□□ -2.15
VPS41YDR080W RNP1P32385 249 aa1.62□□□□□ -2.15
VPS41YDR080W ERG28P40030 148 aa1.62□□□□□ -2.15
VPS41YDR080W RRT13P40042 185 aa1.62□□□□□ -2.15
VPS41YDR080W RPS25AQ3E792 108 aaPredicted RBP1.62□□□□□ -2.15
VPS41YDR080W YLR342W-AQ3E810 57 aa1.62□□□□□ -2.15
VPS41YDR080W RPL24BP24000 155 aaKnown RBP1.61□□□□□ -2.15
VPS41YDR080W RPL16BP26785 198 aaKnown RBP1.61□□□□□ -2.15
VPS41YDR080W YDR115WQ04598 105 aa1.61□□□□□ -2.15
VPS41YDR080W Q0255P03881 472 aa1.61□□□□□ -2.15
VPS41YDR080W KTI12P34253 313 aaKnown RBP1.61□□□□□ -2.15
VPS41YDR080W YHR122WP38829 231 aa1.61□□□□□ -2.15
VPS41YDR080W YNL217WP40152 326 aa1.61□□□□□ -2.15
VPS41YDR080W YLR194CQ05777 254 aa1.61□□□□□ -2.15
VPS41YDR080W PRM4Q12498 284 aa1.61□□□□□ -2.15
VPS41YDR080W CDC50P25656 391 aa1.6□□□□□ -2.15
VPS41YDR080W MRP49P32388 137 aa1.6□□□□□ -2.15
VPS41YDR080W AIM34Q03673 198 aa1.6□□□□□ -2.15
VPS41YDR080W COA2Q3E823 68 aa1.6□□□□□ -2.15
VPS41YDR080W HTB2P02294 131 aa1.6□□□□□ -2.15
VPS41YDR080W QCR9P22289 66 aa1.6□□□□□ -2.15
VPS41YDR080W HSP12P22943 109 aaKnown RBP1.6□□□□□ -2.15
VPS41YDR080W LSM2P38203 95 aaKnown RBP1.6□□□□□ -2.15
VPS41YDR080W COX14P39103 70 aa1.6□□□□□ -2.15
VPS41YDR080W HPA3P39979 161 aa1.6□□□□□ -2.15
VPS41YDR080W MGA1P53050 456 aa1.6□□□□□ -2.15
VPS41YDR080W LSM7P53905 115 aaKnown RBP1.6□□□□□ -2.15
VPS41YDR080W FIT2Q08906 153 aa1.6□□□□□ -2.15
VPS41YDR080W RPL12AP0CX53 165 aaKnown RBP1.59□□□□□ -2.15
VPS41YDR080W RPL12BP0CX54 165 aa1.59□□□□□ -2.15
VPS41YDR080W HYP2P23301 157 aaKnown RBP1.59□□□□□ -2.15
VPS41YDR080W AME1P38313 324 aa1.59□□□□□ -2.15
VPS41YDR080W MMS2P53152 137 aa1.59□□□□□ -2.15
VPS41YDR080W YMR082CQ04276 118 aa1.59□□□□□ -2.15
VPS41YDR080W YMR122W-AQ3E842 84 aa1.59□□□□□ -2.15
VPS41YDR080W TPI1P00942 248 aaKnown RBP1.59□□□□□ -2.15
VPS41YDR080W TOA2P32774 122 aa1.59□□□□□ -2.15
VPS41YDR080W BER1Q06688 274 aaKnown RBP1.59□□□□□ -2.15
VPS41YDR080W YDR029WQ12111 104 aa1.59□□□□□ -2.15
VPS41YDR080W HTZ1Q12692 134 aaKnown RBP1.59□□□□□ -2.15
VPS41YDR080W YBR200W-AQ3E755 54 aa1.59□□□□□ -2.15
VPS41YDR080W YBL112CQ3E7Y4 105 aa1.59□□□□□ -2.15
VPS41YDR080W YMR316C-AI2HB70 103 aa1.59□□□□□ -2.16
VPS41YDR080W UBC5P15732 148 aa1.59□□□□□ -2.16
VPS41YDR080W YCR023CP25351 611 aa1.59□□□□□ -2.16
VPS41YDR080W YEA6P39953 335 aa1.59□□□□□ -2.16
VPS41YDR080W UPS3Q04006 179 aa1.59□□□□□ -2.16
VPS41YDR080W YDR010CQ12426 110 aa1.59□□□□□ -2.16
VPS41YDR080W TFB5Q3E7C1 72 aaPredicted RBP1.59□□□□□ -2.16
VPS41YDR080W YCR024C-BQ3E7Z8 88 aa1.59□□□□□ -2.16
VPS41YDR080W YAR023CD6VPM8 179 aa1.58□□□□□ -2.16
VPS41YDR080W TEM1P38987 245 aa1.58□□□□□ -2.16
VPS41YDR080W YMR320WQ04897 101 aa1.58□□□□□ -2.16
VPS41YDR080W RPL16AP26784 199 aaKnown RBP1.58□□□□□ -2.16
VPS41YDR080W SVP26P38869 228 aa1.58□□□□□ -2.16
VPS41YDR080W PMP3P87284 55 aa1.58□□□□□ -2.16
VPS41YDR080W PEX27Q08580 376 aa1.58□□□□□ -2.16
VPS41YDR080W RDI1Q12434 202 aa1.58□□□□□ -2.16
VPS41YDR080W SPS2P08459 502 aa1.57□□□□□ -2.16
VPS41YDR080W TIR1P10863 254 aa1.57□□□□□ -2.16
VPS41YDR080W SPT14P32363 452 aa1.57□□□□□ -2.16
VPS41YDR080W RPL14AP36105 138 aaKnown RBP1.57□□□□□ -2.16
VPS41YDR080W RPL14BP38754 138 aaKnown RBP1.57□□□□□ -2.16
VPS41YDR080W SER2P42941 309 aa1.57□□□□□ -2.16
VPS41YDR080W YFR057WP43625 151 aa1.57□□□□□ -2.16
VPS41YDR080W MRPL50P53724 139 aa1.57□□□□□ -2.16
VPS41YDR080W YOL085CQ99345 113 aa1.57□□□□□ -2.16
VPS41YDR080W YHR173CP38864 112 aa1.57□□□□□ -2.16
VPS41YDR080W AIM19P40502 157 aa1.57□□□□□ -2.16
VPS41YDR080W DGA1Q08650 418 aa1.57□□□□□ -2.16
VPS41YDR080W PCC1Q3E833 88 aa1.57□□□□□ -2.16
VPS41YDR080W SEC59P20048 519 aa1.56□□□□□ -2.16
VPS41YDR080W HMX1P32339 317 aa1.56□□□□□ -2.16
VPS41YDR080W YEA4P40004 342 aa1.56□□□□□ -2.16
VPS41YDR080W DIA1P54005 336 aa1.56□□□□□ -2.16
VPS41YDR080W ATC1Q04005 294 aa1.56□□□□□ -2.16
VPS41YDR080W MGR3Q04472 501 aa1.56□□□□□ -2.16
VPS41YDR080W CMC4Q3E7A9 73 aa1.56□□□□□ -2.16
VPS41YDR080W RPS0AP32905 252 aaKnown RBP1.56□□□□□ -2.16
VPS41YDR080W PPQ1P32945 549 aa1.56□□□□□ -2.16
VPS41YDR080W DER1P38307 211 aa1.56□□□□□ -2.16
VPS41YDR080W SUR2P38992 349 aa1.56□□□□□ -2.16
VPS41YDR080W YIL059CP40520 121 aa1.56□□□□□ -2.16
VPS41YDR080W RIB4P50861 169 aaPredicted RBP1.56□□□□□ -2.16
VPS41YDR080W RRT15Q3E811 62 aa1.56□□□□□ -2.16
VPS41YDR080W AHT1P29589 182 aa1.56□□□□□ -2.16
VPS41YDR080W YMR007WQ03675 126 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 159.7 ms