RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 SAL1D6W196 494 aa7.02□□□□□ -1.29
LSR1LSR1 MRPL31P14063 131 aaPredicted RBP7.02□□□□□ -1.29
LSR1LSR1 ECM14P38836 430 aa7.02□□□□□ -1.29
LSR1LSR1 YER188WP40103 239 aa7.02□□□□□ -1.29
LSR1LSR1 SGN1P40561 250 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
LSR1LSR1 YNL234WP53857 426 aa7.02□□□□□ -1.29
LSR1LSR1 ARC18Q05933 178 aaKnown RBP7.02□□□□□ -1.29
LSR1LSR1 RXT3Q07458 294 aa7.02□□□□□ -1.29
LSR1LSR1 YPL278CQ08990 100 aa7.02□□□□□ -1.29
LSR1LSR1 YDR215CQ12240 137 aa7.02□□□□□ -1.29
LSR1LSR1 PAI3P01094 68 aa7.01□□□□□ -1.29
LSR1LSR1 YHR213WP0CI67 198 aa7.01□□□□□ -1.29
LSR1LSR1 RPL23AP0CX41 137 aaKnown RBP7.01□□□□□ -1.29
LSR1LSR1 RPL23BP0CX42 137 aaKnown RBP7.01□□□□□ -1.29
LSR1LSR1 YKR070WP36151 352 aaKnown RBP7.01□□□□□ -1.29
LSR1LSR1 YNL200CP40165 246 aaKnown RBP7.01□□□□□ -1.29
LSR1LSR1 DPP1Q05521 289 aa7.01□□□□□ -1.29
LSR1LSR1 FSF1Q12029 327 aaKnown RBP7.01□□□□□ -1.29
LSR1LSR1 ATO3Q12359 275 aa7.01□□□□□ -1.29
LSR1LSR1 MBF1O14467 151 aaKnown RBP7□□□□□ -1.29
LSR1LSR1 DDI2P0CH63 225 aa7□□□□□ -1.29
LSR1LSR1 DDI3P0CH64 225 aa7□□□□□ -1.29
LSR1LSR1 GLE2P40066 365 aa7□□□□□ -1.29
LSR1LSR1 IMP2P46972 177 aa7□□□□□ -1.29
LSR1LSR1 YJL163CP46996 555 aa7□□□□□ -1.29
LSR1LSR1 YGL260WP53056 76 aa7□□□□□ -1.29
LSR1LSR1 YGR017WP53210 297 aa7□□□□□ -1.29
LSR1LSR1 BET5Q03630 159 aa7□□□□□ -1.29
LSR1LSR1 YPL257WQ08974 193 aa7□□□□□ -1.29
LSR1LSR1 YDL009CQ12210 107 aa7□□□□□ -1.29
LSR1LSR1 MRPL20P22354 195 aaPredicted RBP6.99□□□□□ -1.29
LSR1LSR1 PRY2P36110 329 aa6.99□□□□□ -1.29
LSR1LSR1 YFR045WP43617 309 aa6.99□□□□□ -1.29
LSR1LSR1 POP3P53833 195 aaPredicted RBP6.99□□□□□ -1.29
LSR1LSR1 VPS71Q03433 280 aa6.99□□□□□ -1.29
LSR1LSR1 COX17Q12287 69 aa6.99□□□□□ -1.29
LSR1LSR1 YCL048W-AQ2V2Q2 79 aa6.99□□□□□ -1.29
LSR1LSR1 HEM13P11353 328 aaKnown RBP6.98□□□□□ -1.29
LSR1LSR1 YPS1P32329 569 aa6.98□□□□□ -1.29
LSR1LSR1 YKL044WP36092 106 aa6.98□□□□□ -1.29
LSR1LSR1 YMR141CP40211 102 aa6.98□□□□□ -1.29
LSR1LSR1 YPI1P43587 155 aa6.98□□□□□ -1.29
LSR1LSR1 CAB4P53332 305 aa6.98□□□□□ -1.29
LSR1LSR1 UTP23Q12339 254 aaKnown RBP6.98□□□□□ -1.29
LSR1LSR1 CPT1P17898 393 aa6.97□□□□□ -1.29
LSR1LSR1 IES6P32617 166 aa6.97□□□□□ -1.29
LSR1LSR1 GPI18P38211 433 aa6.97□□□□□ -1.29
LSR1LSR1 YER121WP40076 114 aa6.97□□□□□ -1.29
LSR1LSR1 YJL027CP47063 138 aaPredicted RBP6.97□□□□□ -1.29
LSR1LSR1 SWT21P53873 357 aaPredicted RBP6.97□□□□□ -1.29
LSR1LSR1 GTO3Q04806 366 aa6.97□□□□□ -1.29
LSR1LSR1 MSC3Q05812 728 aa6.97□□□□□ -1.29
LSR1LSR1 DAD1Q12248 94 aa6.97□□□□□ -1.29
LSR1LSR1 ARO2P28777 376 aaKnown RBP6.96□□□□□ -1.3
LSR1LSR1 SPC29P33419 253 aa6.96□□□□□ -1.3
LSR1LSR1 APS1P35181 156 aa6.96□□□□□ -1.3
LSR1LSR1 RRT1P38192 103 aa6.96□□□□□ -1.3
LSR1LSR1 DAD4P69851 72 aa6.96□□□□□ -1.3
LSR1LSR1 TIR2P33890 251 aa6.95□□□□□ -1.3
LSR1LSR1 CMC1P36064 111 aa6.95□□□□□ -1.3
LSR1LSR1 YGR045CP53229 120 aa6.95□□□□□ -1.3
LSR1LSR1 ADH6Q04894 360 aaKnown RBP6.95□□□□□ -1.3
LSR1LSR1 TIM18Q08749 192 aa6.95□□□□□ -1.3
LSR1LSR1 YIL102C-AQ2V2P5 75 aa6.95□□□□□ -1.3
LSR1LSR1 RPL27BP0C2H7 136 aaKnown RBP6.94□□□□□ -1.3
LSR1LSR1 CPR1P14832 162 aaKnown RBP6.94□□□□□ -1.3
LSR1LSR1 YHL044WP38727 235 aa6.94□□□□□ -1.3
LSR1LSR1 MBB1P39534 108 aa6.94□□□□□ -1.3
LSR1LSR1 SUT1P53032 299 aaKnown RBP6.94□□□□□ -1.3
LSR1LSR1 YIP1P53039 248 aa6.94□□□□□ -1.3
LSR1LSR1 IRC23Q08416 157 aa6.94□□□□□ -1.3
LSR1LSR1 FCY1Q12178 158 aa6.94□□□□□ -1.3
LSR1LSR1 SCS22Q6Q595 175 aa6.94□□□□□ -1.3
LSR1LSR1 TRA1P38811 3744 aa6.93□□□□□ -1.3
LSR1LSR1 YBR056W-AI2HB52 66 aa6.93□□□□□ -1.3
LSR1LSR1 YIL012WP40551 113 aa6.93□□□□□ -1.3
LSR1LSR1 WWM1P43582 211 aaKnown RBP6.93□□□□□ -1.3
LSR1LSR1 SUR7P54003 302 aa6.93□□□□□ -1.3
LSR1LSR1 ATG39Q06159 398 aa6.93□□□□□ -1.3
LSR1LSR1 IZH3Q07959 543 aa6.93□□□□□ -1.3
LSR1LSR1 JID1Q12350 301 aa6.93□□□□□ -1.3
LSR1LSR1 RPL27AP0C2H6 136 aaKnown RBP6.92□□□□□ -1.3
LSR1LSR1 ERS1P17261 260 aa6.92□□□□□ -1.3
LSR1LSR1 PET8P38921 284 aa6.92□□□□□ -1.3
LSR1LSR1 YDR042CQ03205 200 aa6.92□□□□□ -1.3
LSR1LSR1 IRC25Q07951 179 aa6.92□□□□□ -1.3
LSR1LSR1 YKL023C-AQ2V2P3 75 aa6.92□□□□□ -1.3
LSR1LSR1 SLO1Q3E784 85 aa6.92□□□□□ -1.3
LSR1LSR1 GCN1P33892 2672 aaKnown RBP6.91□□□□□ -1.3
LSR1LSR1 MRPL38P35996 138 aaPredicted RBP6.91□□□□□ -1.3
LSR1LSR1 PBP4Q07362 185 aaKnown RBP6.91□□□□□ -1.3
LSR1LSR1 YLR342W-AQ3E810 57 aa6.91□□□□□ -1.3
LSR1LSR1 SPS100P13130 326 aa6.9□□□□□ -1.3
LSR1LSR1 HYP2P23301 157 aaKnown RBP6.9□□□□□ -1.3
LSR1LSR1 YCR023CP25351 611 aa6.9□□□□□ -1.3
LSR1LSR1 ECM33P38248 429 aaKnown RBP6.9□□□□□ -1.3
LSR1LSR1 SNU13P39990 126 aaKnown RBP6.9□□□□□ -1.3
LSR1LSR1 NCA3P46955 337 aa6.9□□□□□ -1.3
LSR1LSR1 YIL014C-AQ02598 104 aa6.9□□□□□ -1.3
LSR1LSR1 YKR032WP36127 104 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 89.5 ms