RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 MTMR3Q13615 1198 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 MRPL58Q14197 206 aaKnown RBP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 TMEM132DQ14C87 1099 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 CLUL1Q15846 466 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 C9orf57Q5W0N0 161 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 RSPO2Q6UXX9 243 aaPredicted RBP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 CLEC17AQ6ZS10 378 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 CEP57Q86XR8 500 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 NT5DC4Q86YG4 428 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 CBWD2Q8IUF1 395 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 BRSK2Q8IWQ3 736 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 SMRP1Q8NCR6 262 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 FEZF2Q8TBJ5 459 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 CASP10Q92851 521 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 ERCC4Q92889 916 aaPredicted RBP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 BORCS6Q96GS4 357 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 FAM84AQ96KN4 292 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 IPO9Q96P70 1041 aaKnown RBP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 KIAA1586Q9HCI6 787 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 PDE11AQ9HCR9 933 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 DMAC2Q9NW81 257 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 RBAKQ9NYW8 714 aaPredicted RBP7.05□□□□□ -1.28
BRCC3-209ENST00000620502 CD207Q9UJ71 328 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 MKL2Q9ULH7 1088 aa7.05□□□□□ -1.28
BRCC3-209ENST00000620502 PTPRJQ12913 1337 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 ZNF233A6NK53 670 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PDXKO00764 312 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SYN3O14994 580 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 TGM5O43548 720 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 XPOTO43592 962 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PRPF40AO75400 957 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PAPLNO95428 1278 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SPATA31D3P0C874 917 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 RARAP10276 462 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 HOXB8P17481 243 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 MPSTP25325 297 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 MCM4P33991 863 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 CYP2J2P51589 502 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 LILRA4P59901 499 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 CREMQ03060 361 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SMAD4Q13485 552 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SMAD2Q15796 467 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PSMD5Q16401 504 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SNRNP35Q16560 246 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PDXDC1Q6P996 788 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SPATA31D4Q6ZUB0 917 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 HS2ST1Q7LGA3 356 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 ATCAYQ86WG3 371 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PALB2Q86YC2 1186 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 GLYCTKQ8IVS8 523 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 C12orf76Q8N812 135 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 XXYLT1Q8NBI6 393 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 BEST2Q8NFU1 509 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 OR5B17Q8NGF7 314 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 GPR152Q8TDT2 470 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 NOC3LQ8WTT2 800 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SUSD6Q92537 303 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 MFSD14AQ96MC6 490 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 NECAB3Q96P71 396 aaPredicted RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 GSDMAQ96QA5 445 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 APOL5Q9BWW9 433 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 ADAM7Q9H2U9 754 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 DNAJB12Q9NXW2 375 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 DPP3Q9NY33 737 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 CGNQ9P2M7 1197 aaKnown RBP7.04□□□□□ -1.28
BRCC3-209ENST00000620502 MTRRQ9UBK8 725 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 CDH22Q9UJ99 828 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SLC6A14Q9UN76 642 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 MAPK8IP1Q9UQF2 711 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 TRAF3IP3Q9Y228 551 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 PCDHA5Q9Y5H7 936 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 BACE2Q9Y5Z0 518 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 SCN1AP35498 2009 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 TSC2P49815 1807 aa7.04□□□□□ -1.28
BRCC3-209ENST00000620502 C2orf16Q68DN1 1984 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 ABLIM3O94929 683 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 OAZ2O95190 189 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 SRGAP2BP0DMP2 458 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 PAX3P23760 479 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 OR1D2P34982 312 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 EIF1AXP47813 144 aaKnown RBP7.03□□□□□ -1.28
BRCC3-209ENST00000620502 UBE2HP62256 183 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 TFAMQ00059 246 aaKnown RBP7.03□□□□□ -1.28
BRCC3-209ENST00000620502 CYP24A1Q07973 514 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 RAB33AQ14088 237 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 PSMD6Q15008 389 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 NFIL3Q16649 462 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 ZCWPW2Q504Y3 356 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 COBLL1Q53SF7 1204 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 ZNF658Q5TYW1 1059 aaPredicted RBP7.03□□□□□ -1.28
BRCC3-209ENST00000620502 SLC8B1Q6J4K2 584 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 C20orf204Q6ZNR8 217 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 ANKS3Q6ZW76 656 aa7.03□□□□□ -1.28
BRCC3-209ENST00000620502 SMYD4Q8IYR2 804 aaPredicted RBP7.03□□□□□ -1.28
BRCC3-209ENST00000620502 GUF1Q8N442 669 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms