RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 LHX5Q9H2C1 402 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 TLE6Q9H808 572 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 CRTAC1Q9NQ79 661 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 ABHD10Q9NUJ1 306 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 HMGXB4Q9UGU5 601 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 AFF4Q9UHB7 1163 aaKnown RBP11.33□□□□□ -0.6
SMAD4-214ENST00000592186 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
SMAD4-214ENST00000592186 HIDE1A8MVS5 230 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 NCK2O43639 380 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 NRDCO43847 1150 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 SNX16P57768 344 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
SMAD4-214ENST00000592186 CDR2Q01850 454 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 ROR1Q01973 937 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 RSPO2Q6UXX9 243 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-214ENST00000592186 TRIM72Q6ZMU5 477 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 TCEAL8Q8IYN2 117 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 SLC2A14Q8TDB8 520 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 GDPD5Q8WTR4 605 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 SMARCD1Q96GM5 515 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 PCED1BQ96HM7 432 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 PDLIM2Q96JY6 352 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 MED10Q9BTT4 135 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 B3GNT5Q9BYG0 378 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 ZNF518BQ9C0D4 1074 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 NME7Q9Y5B8 376 aa11.32□□□□□ -0.6
SMAD4-214ENST00000592186 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 EPOPA6NHQ4 379 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 O00370 1275 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 PRRG1O14668 218 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 ADAM12O43184 909 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 HCRTO43612 131 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 LSM8O95777 96 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 GLUD1P00367 558 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 OR4Q2P0C623 313 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 FAM200BP0CF97 657 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 PNMA6AP0CW24 399 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 SETSIPP0DME0 302 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 RPL17P18621 184 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 TNFAIP3P21580 790 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 IRS1P35568 1242 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 ADCY1Q08828 1119 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC173Q0VFZ6 552 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 ORC1Q13415 861 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 GRIN2CQ14957 1233 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 PPP1R26Q5T8A7 1209 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 RNF19BQ6ZMZ0 732 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC149Q6ZUS6 474 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC186Q7Z3E2 898 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 NOP9Q86U38 636 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 PALB2Q86YC2 1186 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 TMTC1Q8IUR5 882 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 EPS8L1Q8TE68 723 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 TFAP2BQ92481 460 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 DDX1Q92499 740 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 MYLPFQ96A32 169 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 DUSP16Q9BY84 665 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 PRDM12Q9H4Q4 367 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 NSUN3Q9H649 340 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 EHD2Q9NZN4 543 aa11.31□□□□□ -0.6
SMAD4-214ENST00000592186 NOCTQ9UK39 431 aaKnown RBP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMAD4-214ENST00000592186 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 MTMR11A4FU01 709 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 RFXAPO00287 272 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 SOX1O00570 391 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 TRIM66O15016 1216 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 TGM5O43548 720 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 SRGAP2BP0DMP2 458 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 NPR3P17342 541 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 BDNFP23560 247 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 BRD2P25440 801 aaKnown RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 GRIK1P39086 918 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CLCN4P51793 760 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 BCAT1P54687 386 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 PLD1Q13393 1074 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 TDRD12Q587J7 1177 aaKnown RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 LIN9Q5TKA1 542 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 PAQR9Q6ZVX9 377 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC170Q8IYT3 715 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 ATAD1Q8NBU5 361 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms