RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IRF1P10914 325 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 MAPK9P45984 424 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PRAMEP78395 509 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 ACAP1Q15027 740 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PDK2Q15119 407 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PRAMEF19Q5SWL8 479 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 DENND5BQ6ZUT9 1274 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 ANKS4BQ8N8V4 417 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 OTUB2Q96DC9 234 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 TCF25Q9BQ70 676 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 FAM47E-STBD1D6RA91 191 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 SNHG28P0DPA3 235 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 NCAM1P13591 858 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 CTSEP14091 401 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 SMPD1P17405 629 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 ITGB6P18564 788 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 GPD1P21695 349 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 RARRES1P49788 294 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 GEMP55040 296 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 MESDQ14696 234 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 TBCCQ15814 346 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 CCNG2Q16589 344 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 PPP6R3Q5H9R7 873 aaPredicted RBP6.59□□□□□ -1.36
SMAD4-212ENST00000591126 BSPRYQ5W0U4 402 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 SYDE1Q6ZW31 735 aaPredicted RBP6.59□□□□□ -1.36
SMAD4-212ENST00000591126 NLRP9Q7RTR0 991 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 MAGEC3Q8TD91 643 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 EMID1Q96A84 441 aaPredicted RBP6.59□□□□□ -1.36
SMAD4-212ENST00000591126 HSFY1Q96LI6 401 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 RPRD1AQ96P16 312 aaPredicted RBP6.59□□□□□ -1.36
SMAD4-212ENST00000591126 HAUS8Q9BT25 410 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 CIPCQ9C0C6 399 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 SNTG2Q9NY99 539 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 DEC1Q9P2X7 70 aa6.59□□□□□ -1.36
SMAD4-212ENST00000591126 SNX2O60749 519 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 FSHRP23945 695 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ACOT2P49753 483 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 BLKP51451 505 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 AIF1P55008 147 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TBX4P57082 545 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CUL1Q13616 776 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 WHAMMP3Q1A5X7 153 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 MPPE1Q53F39 396 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TCP11X2Q5H9J9 407 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GLYCTKQ8IVS8 523 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 OR8D1Q8WZ84 308 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 FUBP3Q96I24 572 aaKnown RBP eCLIP6.58□□□□□ -1.361e-7■■□□□ 12.2
SMAD4-212ENST00000591126 DDX23Q9BUQ8 820 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 SIK2Q9H0K1 926 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ECT2Q9H8V3 914 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ADAM28Q9UKQ2 775 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 PADI3Q9ULW8 664 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 C2orf81A6NN90 581 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 HDCP19113 662 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ARHGAP25P42331 645 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 FMO5P49326 533 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CUL2Q13617 745 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TSTA3Q13630 321 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 SEPT6Q14141 434 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 HIST2H2ACQ16777 129 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 HIST2H2AA3Q6FI13 130 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TTC8Q8TAM2 541 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 PDCD6IPQ8WUM4 868 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 SENP8Q96LD8 212 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TBCBQ99426 244 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CORO1BQ9BR76 489 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GIMAP4Q9NUV9 329 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 INTS13Q9NVM9 706 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 WBP1LQ9NX94 342 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 VPS28Q9UK41 221 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 A0A088AWK7 358 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 A0A1W2PPC1 479 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GTPBP10A4D1E9 387 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CCDC188H7C350 402 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 RBAK-RBAKDNI3L0D1 243 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CREB3O43889 395 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 LRRN2O75325 713 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ECEL1O95672 775 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 PDGFRBP09619 1106 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ATP4AP20648 1035 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ZNF10P21506 573 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CDC25BP30305 580 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GRK3P35626 688 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 SNRPD1P62314 119 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 SETDB1Q15047 1291 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 ZFPM1Q8IX07 1006 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 MAB21L3Q8N8X9 362 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 C7orf57Q8NEG2 295 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 DEPDC1BQ8WUY9 529 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 LNPEPQ9UIQ6 1025 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 AAR2Q9Y312 384 aaKnown RBP6.58□□□□□ -1.36
SMAD4-212ENST00000591126 GLI3P10071 1580 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 CASTOR2A6NHX0 329 aa6.58□□□□□ -1.36
SMAD4-212ENST00000591126 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms