RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
PDE4A-207ENST00000590407 FAM189A1O60320 539 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 FGFR1P11362 822 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ATP4AP20648 1035 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 MARK3P27448 753 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 YWHAEP62258 255 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ACAP1Q15027 740 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 HADHQ16836 314 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ZBTB41Q5SVQ8 909 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 LONP2Q86WA8 852 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 WDTC1Q8N5D0 677 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ZBTB45Q96K62 511 aaPredicted RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 PAFAH2Q99487 392 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TMEM121Q9BTD3 319 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 WDR35Q9P2L0 1181 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 FBXO40Q9UH90 709 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 POLIQ9UNA4 740 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 RIPK3Q9Y572 518 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 A6NHS1 94 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 LRRIQ4A6NIV6 560 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 KLF11O14901 512 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ADCY3O60266 1144 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 CCDC22O60826 627 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 EFNA5P52803 228 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 OTUD4Q01804 1114 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 SLC18A2Q05940 514 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 MTMR2Q13614 643 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 KRT72Q14CN4 511 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TAF11Q15544 211 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TARBP2Q15633 366 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 MAPK6Q16659 721 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ACTL9Q8TC94 416 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 SLC7A3Q8WY07 619 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 APBB2Q92870 758 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TMEM143Q96AN5 459 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 WDR83Q9BRX9 315 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 TRIM55Q9BYV6 548 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 FRMD8Q9BZ67 464 aaPredicted RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 MMADHCQ9H3L0 296 aaPredicted RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 DCLRE1BQ9H816 532 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ZNF302Q9NR11 478 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 CISHQ9NSE2 258 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 KANSL3Q9P2N6 904 aa12.99□□□□□ -0.33
PDE4A-207ENST00000590407 NKX1-2Q9UD57 310 aaPredicted RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
PDE4A-207ENST00000590407 LOC285556D6RIA3 1793 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 APBA3O96018 575 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 ACADSP16219 412 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 GM2AP17900 193 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 ATP6V1C1P21283 382 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 ADRA1DP25100 572 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 BRD2P25440 801 aaKnown RBP12.98□□□□□ -0.33
PDE4A-207ENST00000590407 ETV4P43268 484 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 PSEN1P49768 467 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 NEK3P51956 506 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 TFDP1Q14186 410 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 FNBP1LQ5T0N5 605 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 C3orf62Q6ZUJ4 267 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 PDIK1LQ8N165 341 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 CMASQ8NFW8 434 aaPredicted RBP12.98□□□□□ -0.33
PDE4A-207ENST00000590407 PTCD3Q96EY7 689 aaKnown RBP12.98□□□□□ -0.33
PDE4A-207ENST00000590407 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 CYTH2Q99418 400 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 PNPLA8Q9NP80 782 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 DOCK1Q14185 1865 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 DOCK5Q9H7D0 1870 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 PHIPQ8WWQ0 1821 aa12.98□□□□□ -0.33
PDE4A-207ENST00000590407 IQANK1A0A1B0GTG1 560 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 APOC4-APOC2K7ER74 178 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 TOM1L1O75674 476 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 IFNB1P01574 187 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 APOC2P02655 101 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 KDELR1P24390 212 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 PSMA2P25787 234 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 EPHB2P29323 1055 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 BACE1P56817 501 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 CDK18Q07002 472 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 MSS51Q4VC12 460 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 PLEKHG4Q58EX7 1191 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 ANKRD22Q5VYY1 191 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 CDCA2Q69YH5 1023 aaPredicted RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SNRNP48Q6IEG0 339 aaKnown RBP12.97□□□□□ -0.33
PDE4A-207ENST00000590407 C4orf50Q6ZRC1 276 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 SH2D5Q6ZV89 423 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 RHPN2Q8IUC4 686 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
PDE4A-207ENST00000590407 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms