RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 ZNF689Q96CS4 500 aaPredicted RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 KIF12Q96FN5 646 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 ZMAT2Q96NC0 199 aaKnown RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 SELENOOQ9BVL4 669 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 ZNF518BQ9C0D4 1074 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 CXCL16Q9H2A7 254 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 DPP3Q9NY33 737 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 LMCD1Q9NZU5 365 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 PIN4Q9Y237 131 aaKnown RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 FAM170AA1A519 330 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 CCDC66A2RUB6 948 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 CCDC188H7C350 402 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 GRM6O15303 877 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 RRP9O43818 475 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 CEP104O60308 925 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 KRT19P08727 400 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 FGFR1P11362 822 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 P4HA1P13674 534 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 COMTP21964 271 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MCM3P25205 808 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MAN1A1P33908 653 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MARCKSL1P49006 195 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 PEX5P50542 639 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 YARSP54577 528 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 WDR72Q3MJ13 1102 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 BEND6Q5SZJ8 279 aaPredicted RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MMS22LQ6ZRQ5 1243 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 SLC24A5Q71RS6 500 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 CPNE8Q86YQ8 564 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 PASD1Q8IV76 773 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 SLC4A11Q8NBS3 891 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 RNF169Q8NCN4 708 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 SMG8Q8ND04 991 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 C1orf131Q8NDD1 294 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 BEST2Q8NFU1 509 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 CPA5Q8WXQ8 436 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 KRT35Q92764 455 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MRPL38Q96DV4 380 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 HPDLQ96IR7 371 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 NECAB3Q96P71 396 aaPredicted RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 TWNKQ96RR1 684 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 C11orf70Q9BRQ4 267 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 ELOVL4Q9GZR5 314 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 LHX5Q9H2C1 402 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 ALG13Q9NP73 1137 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 RGS18Q9NS28 235 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 ADAM22Q9P0K1 906 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 HMGXB4Q9UGU5 601 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 CHORDC1Q9UHD1 332 aaPredicted RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 UBQLN1Q9UMX0 589 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 AGAP1Q9UPQ3 857 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MRPL42Q9Y6G3 142 aaKnown RBP9.97□□□□□ -0.81
VPS25-205ENST00000590339 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 MYO9BQ13459 2157 aa9.97□□□□□ -0.81
VPS25-205ENST00000590339 TBKBP1A7MCY6 615 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 C9IYK1 514 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 PPEF2O14830 753 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 MED7O43513 233 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 ERLIN1O75477 346 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 PROSCO94903 275 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 SEC31AO94979 1220 aaKnown RBP9.96□□□□□ -0.82
VPS25-205ENST00000590339 CLSTN1O94985 981 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 CALB1P05937 261 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 RB1P06400 928 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 BMP1P13497 986 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 CYP3A5P20815 502 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 TNNC1P63316 161 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 MESDQ14696 234 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 CLUL1Q15846 466 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 LONRF2Q1L5Z9 754 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 AAK1Q2M2I8 961 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 TCEAL5Q5H9L2 206 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 CCDC70Q6NSX1 233 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 C8orf74Q6P047 294 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 LLGL2Q6P1M3 1020 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 DENND1BQ6P3S1 775 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 CMTR2Q8IYT2 770 aaKnown RBP9.96□□□□□ -0.82
VPS25-205ENST00000590339 CRIPAKQ8N1N5 446 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 WDTC1Q8N5D0 677 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 UBL4BQ8N7F7 174 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 TMEM35BQ8NCS4 154 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 BTBD6Q96KE9 485 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 LRRC1Q9BTT6 524 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 ARFGAP3Q9NP61 516 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 STIM2Q9P246 746 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 DMGDHQ9UI17 866 aaKnown RBP9.96□□□□□ -0.82
VPS25-205ENST00000590339 ANAPC7Q9UJX3 599 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 BARX2Q9UMQ3 279 aaPredicted RBP9.96□□□□□ -0.82
VPS25-205ENST00000590339 HES2Q9Y543 173 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 IPPQ9Y573 584 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 PCDHA3Q9Y5H8 950 aa9.96□□□□□ -0.82
VPS25-205ENST00000590339 GBF1Q92538 1859 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms