RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 CCDC142Q17RM4 750 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 ATAT1Q5SQI0 421 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 GPR149Q86SP6 731 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 TTC9BQ8N6N2 239 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 WHAMMQ8TF30 809 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 ATXN2LQ8WWM7 1075 aaKnown RBP16.51■□□□□ 0.23
GHDC-209ENST00000588762 KAT5Q92993 513 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 HEXIM2Q96MH2 286 aaKnown RBP16.51■□□□□ 0.23
GHDC-209ENST00000588762 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 LPIN3Q9BQK8 851 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 CRISPLD1Q9H336 500 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 SIX2Q9NPC8 291 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
GHDC-209ENST00000588762 DOCK6Q96HP0 2047 aa16.51■□□□□ 0.23
GHDC-209ENST00000588762 POU2F2P09086 479 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 KRT5P13647 590 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 RFX1P22670 979 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 BDNFP23560 247 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 CYP2F1P24903 491 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 MAGEA11P43364 429 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 MRPS5P82675 430 aaKnown RBP16.5■□□□□ 0.23
GHDC-209ENST00000588762 FANCCQ00597 558 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 APBA1Q02410 837 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 VEPH1Q14D04 833 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 ARHGAP44Q17R89 818 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 PTCRAQ6ISU1 281 aaPredicted RBP16.5■□□□□ 0.23
GHDC-209ENST00000588762 GJB7Q6PEY0 223 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 TMEM270Q6UE05 265 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 VSTM1Q6UX27 236 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 SCN4BQ8IWT1 228 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 UBR7Q8N806 425 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 SLC4A11Q8NBS3 891 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 ZNF707Q96C28 371 aaPredicted RBP16.5■□□□□ 0.23
GHDC-209ENST00000588762 ZNF512Q96ME7 567 aaPredicted RBP16.5■□□□□ 0.23
GHDC-209ENST00000588762 ERGIC2Q96RQ1 377 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 B3GNT5Q9BYG0 378 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 RHOBTB2Q9BYZ6 727 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 PLCB1Q9NQ66 1216 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 DNAJC12Q9UKB3 198 aa16.5■□□□□ 0.23
GHDC-209ENST00000588762 USP15Q9Y4E8 981 aaPredicted RBP16.5■□□□□ 0.23
GHDC-209ENST00000588762 GREB1Q4ZG55 1949 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 GRXCR2A6NFK2 248 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 CLDN5O00501 218 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 MBTPS2O43462 519 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 SOAT2O75908 522 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 PAPLNO95428 1278 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 PAEPP09466 180 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
GHDC-209ENST00000588762 TAF12Q16514 161 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 KLHDC7AQ5VTJ3 777 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 SMYD5Q6GMV2 418 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 ITIH5Q86UX2 942 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 C12orf29Q8N999 325 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 RBBP8NLQ8NC74 664 aaPredicted RBP16.49■□□□□ 0.23
GHDC-209ENST00000588762 NEK11Q8NG66 645 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
GHDC-209ENST00000588762 CYFIP2Q96F07 1278 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 NECTIN4Q96NY8 510 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 FAM207AQ9NSI2 230 aaPredicted RBP16.49■□□□□ 0.23
GHDC-209ENST00000588762 KIAA1257Q9ULG3 409 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
GHDC-209ENST00000588762 DENND4AQ7Z401 1863 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 A0A1B0GTH6 734 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 TRIM66O15016 1216 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 CCDC130P13994 396 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 UCHL3P15374 230 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 CD19P15391 556 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 PTPN2P17706 415 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 ANXA13P27216 316 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 GRIK1P39086 918 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 USP8P40818 1118 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 UBASH3AP57075 661 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 RAPGEF1Q13905 1077 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
GHDC-209ENST00000588762 SGO2Q562F6 1265 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 FAM35AQ86V20 835 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 FUKQ8N0W3 1084 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 SLC2A14Q8TDB8 520 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 SMARCD1Q96GM5 515 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 HNRNPABQ99729 332 aaKnown RBP16.48■□□□□ 0.23
GHDC-209ENST00000588762 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 SIK3Q9Y2K2 1263 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 DAAM1Q9Y4D1 1078 aa16.48■□□□□ 0.23
GHDC-209ENST00000588762 ZNF638Q14966 1978 aaKnown RBP16.47■□□□□ 0.23
GHDC-209ENST00000588762 XIRP2A4UGR9 3374 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 TEX33O43247 280 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 AP1G2O75843 785 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 TPM3P06753 285 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 VDRP11473 427 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 ATF6P18850 670 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 ADORA2BP29275 332 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 KLK7P49862 253 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 DDR2Q16832 855 aa16.47■□□□□ 0.23
GHDC-209ENST00000588762 DPY19L2P1Q6NXN4 242 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms