RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 MDH1BQ5I0G3 518 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 ZNF658Q5TYW1 1059 aaPredicted RBP20.35■□□□□ 0.85
TPM4-204ENST00000586499 SCARA5Q6ZMJ2 495 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 PCED1BQ96HM7 432 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 LRRC3BQ96PB8 259 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 BRD9Q9H8M2 597 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 VRTNQ9H8Y1 702 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 MAGEC2Q9UBF1 373 aaPredicted RBP20.35■□□□□ 0.85
TPM4-204ENST00000586499 SLC38A8A6NNN8 435 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 H0Y858 1186 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 IKBKBO14920 756 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 MAPK13O15264 365 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 GALR2O43603 387 aaPredicted RBP20.34■□□□□ 0.85
TPM4-204ENST00000586499 SMC2O95347 1197 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 F11P03951 625 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 FAM163BP0C2L3 166 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 CSH1P0DML2 217 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 CSH2P0DML3 217 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 PSMC3P17980 439 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 PTPN1P18031 435 aaKnown RBP20.34■□□□□ 0.85
TPM4-204ENST00000586499 CD72P21854 359 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 RPL13P26373 211 aaKnown RBP20.34■□□□□ 0.85
TPM4-204ENST00000586499 CDC25CP30307 473 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 PSMC2P35998 433 aaKnown RBP20.34■□□□□ 0.85
TPM4-204ENST00000586499 NLRP12P59046 1061 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 STARD6P59095 220 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 PFKPQ01813 784 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 PPP3CAQ08209 521 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 MLF2Q15773 248 aaPredicted RBP20.34■□□□□ 0.85
TPM4-204ENST00000586499 ARHGAP15Q53QZ3 475 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 ZNF667Q5HYK9 610 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 SPOPLQ6IQ16 392 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 PHLDB3Q6NSJ2 640 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 C4orf50Q6ZRC1 276 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 MFSD6LQ8IWD5 586 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 MYCBPAPQ8TBZ2 947 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 FUBP3Q96I24 572 aaKnown RBP eCLIP20.34■□□□□ 0.85
TPM4-204ENST00000586499 PRRX2Q99811 253 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 SLC46A2Q9BY10 475 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 SMG9Q9H0W8 520 aaKnown RBP20.34■□□□□ 0.85
TPM4-204ENST00000586499 TASP1Q9H6P5 420 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 MMRN2Q9H8L6 949 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 HEBP1Q9NRV9 189 aa20.34■□□□□ 0.85
TPM4-204ENST00000586499 A8MXQ7 604 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 LRRN2O75325 713 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 HLA-DRAP01903 254 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 DCNP07585 359 aaKnown RBP20.33■□□□□ 0.85
TPM4-204ENST00000586499 GCLMP48507 274 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 PMS1P54277 932 aaKnown RBP20.33■□□□□ 0.85
TPM4-204ENST00000586499 PTPN5P54829 565 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 SGSM1Q2NKQ1 1148 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 EDRF1Q3B7T1 1238 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.85
TPM4-204ENST00000586499 GCNAQ96QF7 691 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 PHOX2BQ99453 314 aa20.33■□□□□ 0.85
TPM4-204ENST00000586499 NOL4O94818 638 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 PRAMEF12O95522 483 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 KRT13P13646 458 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 GRIK1P39086 918 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 PIK3CAP42336 1068 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 MAGEA11P43364 429 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 CACNA2D1P54289 1103 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
TPM4-204ENST00000586499 ANKRD40Q6AI12 368 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 MAB21L3Q8N8X9 362 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 SHDQ96IW2 340 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 FAM86C1Q9NVL1 165 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 HOOK1Q9UJC3 728 aaKnown RBP20.32■□□□□ 0.84
TPM4-204ENST00000586499 MAN1B1Q9UKM7 699 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 SIT1Q9Y3P8 196 aa20.32■□□□□ 0.84
TPM4-204ENST00000586499 MTF2Q9Y483 593 aaPredicted RBP20.32■□□□□ 0.84
TPM4-204ENST00000586499 KANSL1LA0AUZ9 987 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 TRIM49BA6NDI0 452 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 CLDN5O00501 218 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 KINO60870 393 aaKnown RBP20.31■□□□□ 0.84
TPM4-204ENST00000586499 TADA3O75528 432 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 ASS1P00966 412 aaKnown RBP20.31■□□□□ 0.84
TPM4-204ENST00000586499 NUBP1P53384 320 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 PRKCQQ04759 706 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 COBLL1Q53SF7 1204 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 TXNDC8Q6A555 127 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 TPRG1Q6ZUI0 275 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 CCDC105Q8IYK2 499 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 ADSSL1Q8N142 457 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 B3GALNT2Q8NCR0 500 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 TAS1R2Q8TE23 839 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 DEPDC1BQ8WUY9 529 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 DDX23Q9BUQ8 820 aaKnown RBP20.31■□□□□ 0.84
TPM4-204ENST00000586499 B3GNT5Q9BYG0 378 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 TMEM30AQ9NV96 361 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 CHMP5Q9NZZ3 219 aa20.31■□□□□ 0.84
TPM4-204ENST00000586499 SHISA7A6NL88 538 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 ZNF263O14978 683 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 CETN3O15182 167 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 GLULP15104 373 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 CD44P16070 742 aaKnown RBP20.3■□□□□ 0.84
TPM4-204ENST00000586499 USP46P62068 366 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 ORC1Q13415 861 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 VSTM1Q6UX27 236 aa20.3■□□□□ 0.84
TPM4-204ENST00000586499 CMTM8Q8IZV2 173 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms