RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TPD52P55327 224 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 FOXO4P98177 505 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TBL3Q12788 808 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 DCTN2Q13561 401 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 SSPNQ14714 243 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 ARL13BQ3SXY8 428 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 PLEKHG4Q58EX7 1191 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 FIGNQ5HY92 759 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 KCTD16Q68DU8 428 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TWF2Q6IBS0 349 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CPLX4Q7Z7G2 160 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TBC1D1Q86TI0 1168 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 C1QL4Q86Z23 238 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TCP11L2Q8N4U5 519 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 MMGT1Q8N4V1 131 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 DCLK2Q8N568 766 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 ABTB1Q969K4 478 aaPredicted RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 FAM136AQ96C01 138 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 PRPF18Q99633 342 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 KRT23Q9C075 422 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 NSRP1Q9H0G5 558 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 GBA3Q9H227 469 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 TPK1Q9H3S4 243 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 CNOT10Q9H9A5 744 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 PIH1D3Q9NQM4 214 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 FANCLQ9NW38 375 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 PTTG2Q9NZH5 202 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 INTUQ9ULD6 942 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 SRPK3Q9UPE1 567 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 PLAAQ9Y263 795 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 NOSIPQ9Y314 301 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.49□□□□□ -1.37
SMAD4-203ENST00000585448 NUMBLQ9Y6R0 609 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 MROH7Q68CQ1 1323 aa6.49□□□□□ -1.37
SMAD4-203ENST00000585448 DNMBPQ6XZF7 1577 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 MAGI2Q86UL8 1455 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 JCADQ9P266 1359 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SETD1BQ9UPS6 1966 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TCRBV5S4A2TA0A5A2 114 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 NKRFO15226 690 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SERPINB7O75635 380 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ATP5HO75947 161 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SERPINC1P01008 464 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 C8BP07358 591 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CYP2C8P10632 490 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 UBL4AP11441 157 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 GNAT2P19087 354 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TKTP29401 623 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 IGFALSP35858 605 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 RGS2P41220 211 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 MSH2P43246 934 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CLK1P49759 484 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 GPC3P51654 580 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 VAV2P52735 878 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SEC24CP53992 1094 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 NCKAP1LP55160 1127 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 HSPA14Q0VDF9 509 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ITGB3BPQ13352 177 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 KARSQ15046 597 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 C15orf59Q2T9L4 293 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CR1LQ2VPA4 569 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 LIN52Q52LA3 116 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 WASHC2DQ5SRD0 308 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 AGBL2Q5U5Z8 902 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CIAPIN1Q6FI81 312 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 HHIPL2Q6UWX4 724 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CCDC129Q6ZRS4 1044 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 UNC13DQ70J99 1090 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 KCTD1Q719H9 257 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 RASGRP2Q7LDG7 609 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TRAPPC11Q7Z392 1133 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 PPP1R42Q7Z4L9 355 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 FGD2Q7Z6J4 655 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 VPS36Q86VN1 386 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ZC3H7AQ8IWR0 971 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 RHOT2Q8IXI1 618 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SPARTQ8N0X7 666 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ENDOVQ8N8Q3 282 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ARRDC4Q8NCT1 418 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 CAGE1Q8TC20 777 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SH3RF2Q8TEC5 729 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 FBXO41Q8TF61 875 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ARL8AQ96BM9 186 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 MED30Q96HR3 178 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 PGBD1Q96JS3 809 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 C8orf48Q96LL4 319 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 MAP3K14Q99558 947 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ORAI3Q9BRQ5 295 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TM6SF1Q9BZW5 370 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 INO80BQ9C086 356 aaPredicted RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 NDEL1Q9GZM8 345 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 RNPEPL1Q9HAU8 725 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TCF7L2Q9NQB0 619 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 FAM114A2Q9NRY5 505 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms